DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx1A and SYP112

DIOPT Version :9

Sequence 1:NP_001189276.1 Gene:Syx1A / 42854 FlyBaseID:FBgn0013343 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_001318245.1 Gene:SYP112 / 816342 AraportID:AT2G18260 Length:305 Species:Arabidopsis thaliana


Alignment Length:306 Identity:77/306 - (25%)
Similarity:153/306 - (50%) Gaps:43/306 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MTKDRLAALH---AAQSDDEEETEVAVNVD-------GHDSYMDDFFAQVEEIRGMIDKV----- 50
            |||..|:.:.   .|::|.|.:.::....|       ..:..:..||.::|.|:.:|:::     
plant     5 MTKSFLSYVELKKQARTDMESDRDLEKGEDFNFDFSPADEENLSGFFQEIETIKTLIEEITHLLL 69

  Fly    51 --QDNVEEVKKKHSA-ILSAPQTDEKTKQELEDLMADIKKNANRVRGKLKGIE-QNIEQEEQQNK 111
              |:..||.|..||. ||..      .:..:|..:..|.:.||.|:..::.:| :|:.......:
plant    70 DLQNLNEETKSTHSTKILRG------LRDRMESNIVTISRKANTVKTLIETLEKRNVANRTSFKE 128

  Fly   112 SSADLRIRKTQHSTLSRKFVEVMTEYNRTQ----TDYRERCKGRIQRQLEITGRPTNDDELEKML 172
            .|...|.|.:..:.:.:|..:.|:|::|.:    .||||..|   ::....||...:::::|||:
plant   129 GSCVDRTRTSITNGVRKKLRDTMSEFHRLRERIFADYREDLK---RKYFLATGEEPSNEDMEKMI 190

  Fly   173 EEGNSSVFTQGIIMETQQAKQTLADIEA--RHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDR 235
            ....|.    ..:::|.:.|..: |::.  ||:.:..::.|:..||.:|:|||:|||:||:.||.
plant   191 SGSGSC----SDLVKTFEVKPEM-DLKTKERHEAVNDIKRSLNRLHQVFLDMAVLVETQGDRIDD 250

  Fly   236 IEYHVEHAMDYVQTATQDTKKALKYQSKARRKKIMILICLTVLGIL 281
            ||.:|.:|..:|...|    .:|.|.::.::|....::.:::||:|
plant   251 IEANVANAGSFVSGGT----NSLYYANQMKKKTKSWVLWVSILGVL 292

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx1ANP_001189276.1 Syntaxin 33..230 CDD:395647 53/211 (25%)
SNARE 231..281 CDD:399038 13/49 (27%)
SYP112NP_001318245.1 Syntaxin 47..245 CDD:366315 53/211 (25%)
SNARE 214..279 CDD:389950 24/68 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 91 1.000 Domainoid score I2612
eggNOG 1 0.900 - - E1_COG5074
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 116 1.000 Inparanoid score I2016
OMA 1 1.010 - - QHG53912
OrthoDB 1 1.010 - - D1033833at2759
OrthoFinder 1 1.000 - - FOG0000185
OrthoInspector 1 1.000 - - otm2646
orthoMCL 1 0.900 - - OOG6_100497
Panther 1 1.100 - - O PTHR19957
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
109.880

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