DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx1A and stx1b

DIOPT Version :10

Sequence 1:NP_001189276.1 Gene:Syx1A / 42854 FlyBaseID:FBgn0013343 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_571598.1 Gene:stx1b / 58038 ZFINID:ZDB-GENE-000330-4 Length:288 Species:Danio rerio


Alignment Length:285 Identity:194/285 - (68%)
Similarity:235/285 - (82%) Gaps:5/285 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDRLAALHAAQ-SDDEEETEVAVNVDGHDSYMDDFFAQVEEIRGMIDKVQDNVEEVKKKHSAILS 66
            |||...|.:|: |||:||   .|:|| .|.:||:||.|||||||.|:|:.::||:|||:|||||:
Zfish     2 KDRTQELRSAKDSDDDEE---VVHVD-RDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAILA 62

  Fly    67 APQTDEKTKQELEDLMADIKKNANRVRGKLKGIEQNIEQEEQQNKSSADLRIRKTQHSTLSRKFV 131
            ||..|||||||||||.|||||.||:||.|||.|||:|||||..|:||||||||||||||||||||
Zfish    63 APNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFV 127

  Fly   132 EVMTEYNRTQTDYRERCKGRIQRQLEITGRPTNDDELEKMLEEGNSSVFTQGIIMETQQAKQTLA 196
            |||||||.||:.||:|||.|||||||||||.|.::|||.|||.|..::||..|.|::|..||.|.
Zfish   128 EVMTEYNTTQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDIKMDSQMTKQALN 192

  Fly   197 DIEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQ 261
            :||.||.:|:|||.||:||||||:||||||||||||||||||:|||::|||:.|..|||||:|||
Zfish   193 EIETRHTEIIKLENSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQ 257

  Fly   262 SKARRKKIMILICLTVLGILAASYV 286
            |:||:|||||:||..:||::..|.:
Zfish   258 SQARKKKIMIIICCVILGVVLRSSI 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx1ANP_001189276.1 Syntaxin 35..230 CDD:459942 140/194 (72%)
SNARE 231..281 CDD:461727 35/49 (71%)
stx1bNP_571598.1 SynN 29..180 CDD:238105 112/150 (75%)
SNARE_syntaxin1 190..258 CDD:277233 49/67 (73%)

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