DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx1A and Stx1b

DIOPT Version :9

Sequence 1:NP_001189276.1 Gene:Syx1A / 42854 FlyBaseID:FBgn0013343 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_036832.1 Gene:Stx1b / 24923 RGDID:3784 Length:288 Species:Rattus norvegicus


Alignment Length:285 Identity:200/285 - (70%)
Similarity:237/285 - (83%) Gaps:5/285 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDRLAALHAAQ-SDDEEETEVAVNVDGHDSYMDDFFAQVEEIRGMIDKVQDNVEEVKKKHSAILS 66
            |||...|.:|: ||||||   .|:|| .|.:||:||.|||||||.|:|:.::||:|||:|||||:
  Rat     2 KDRTQELRSAKDSDDEEE---VVHVD-RDHFMDEFFEQVEEIRGCIEKLSEDVEQVKKQHSAILA 62

  Fly    67 APQTDEKTKQELEDLMADIKKNANRVRGKLKGIEQNIEQEEQQNKSSADLRIRKTQHSTLSRKFV 131
            ||..|||||||||||.|||||.||:||.|||.|||:|||||..|:||||||||||||||||||||
  Rat    63 APNPDEKTKQELEDLTADIKKTANKVRSKLKAIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFV 127

  Fly   132 EVMTEYNRTQTDYRERCKGRIQRQLEITGRPTNDDELEKMLEEGNSSVFTQGIIMETQQAKQTLA 196
            |||||||.||:.||:|||.|||||||||||.|.::|||.|||.|..::||..|.|::|..||.|.
  Rat   128 EVMTEYNATQSKYRDRCKDRIQRQLEITGRTTTNEELEDMLESGKLAIFTDDIKMDSQMTKQALN 192

  Fly   197 DIEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQ 261
            :||.||.:|:||||||:||||||:||||||||||||||||||:|||::|||:.|..|||||:|||
  Rat   193 EIETRHNEIIKLETSIRELHDMFVDMAMLVESQGEMIDRIEYNVEHSVDYVERAVSDTKKAVKYQ 257

  Fly   262 SKARRKKIMILICLTVLGILAASYV 286
            ||||||||||:||..|||::.||.:
  Rat   258 SKARRKKIMIIICCVVLGVVLASSI 282

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx1ANP_001189276.1 Syntaxin 33..230 CDD:395647 143/196 (73%)
SNARE 231..281 CDD:399038 38/49 (78%)
Stx1bNP_036832.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 11/20 (55%)
Syntaxin 29..226 CDD:395647 143/196 (73%)
SNARE 227..278 CDD:399038 38/50 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166353302
Domainoid 1 1.000 300 1.000 Domainoid score I1370
eggNOG 1 0.900 - - E1_COG5074
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 400 1.000 Inparanoid score I1875
OMA 1 1.010 - - QHG53912
OrthoDB 1 1.010 - - D1033833at2759
OrthoFinder 1 1.000 - - FOG0000185
OrthoInspector 1 1.000 - - otm44526
orthoMCL 1 0.900 - - OOG6_100497
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2898
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.670

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