DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syx1A and Stx1a

DIOPT Version :9

Sequence 1:NP_001189276.1 Gene:Syx1A / 42854 FlyBaseID:FBgn0013343 Length:296 Species:Drosophila melanogaster
Sequence 2:NP_058081.2 Gene:Stx1a / 20907 MGIID:109355 Length:288 Species:Mus musculus


Alignment Length:288 Identity:202/288 - (70%)
Similarity:241/288 - (83%) Gaps:2/288 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 KDRLAALHAAQSDDEEETEVAVNVDGHDSYMDDFFAQVEEIRGMIDKVQDNVEEVKKKHSAILSA 67
            |||...|..|:..|::: :|.|.|| .|.:||:||.|||||||.|||:.:||||||:||||||::
Mouse     2 KDRTQELRTAKDSDDDD-DVTVTVD-RDRFMDEFFEQVEEIRGFIDKIAENVEEVKRKHSAILAS 64

  Fly    68 PQTDEKTKQELEDLMADIKKNANRVRGKLKGIEQNIEQEEQQNKSSADLRIRKTQHSTLSRKFVE 132
            |..|||||:|||:||:||||.||:||.|||.|||:|||||..|:|||||||||||||||||||||
Mouse    65 PNPDEKTKEELEELMSDIKKTANKVRSKLKSIEQSIEQEEGLNRSSADLRIRKTQHSTLSRKFVE 129

  Fly   133 VMTEYNRTQTDYRERCKGRIQRQLEITGRPTNDDELEKMLEEGNSSVFTQGIIMETQQAKQTLAD 197
            ||:|||.||:|||||||||||||||||||.|..:|||.|||.||.::|..||||::..:||.|::
Mouse   130 VMSEYNATQSDYRERCKGRIQRQLEITGRTTTSEELEDMLESGNPAIFASGIIMDSSISKQALSE 194

  Fly   198 IEARHQDIMKLETSIKELHDMFMDMAMLVESQGEMIDRIEYHVEHAMDYVQTATQDTKKALKYQS 262
            ||.||.:|:||||||:|||||||||||||||||||||||||:||||:|||:.|..|||||:||||
Mouse   195 IETRHSEIIKLETSIRELHDMFMDMAMLVESQGEMIDRIEYNVEHAVDYVERAVSDTKKAVKYQS 259

  Fly   263 KARRKKIMILICLTVLGILAASYVSSYF 290
            |||||||||:||..:|||:.||.:...|
Mouse   260 KARRKKIMIIICCVILGIIIASTIGGIF 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syx1ANP_001189276.1 Syntaxin 33..230 CDD:395647 147/196 (75%)
SNARE 231..281 CDD:399038 38/49 (78%)
Stx1aNP_058081.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20 6/18 (33%)
Syntaxin 30..227 CDD:279182 147/196 (75%)
SynN 30..181 CDD:238105 114/150 (76%)
SNARE_syntaxin1 191..259 CDD:277233 52/67 (78%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167849650
Domainoid 1 1.000 302 1.000 Domainoid score I1400
eggNOG 1 0.900 - - E1_COG5074
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H37941
Inparanoid 1 1.050 402 1.000 Inparanoid score I1912
Isobase 1 0.950 - 0 Normalized mean entropy S873
OMA 1 1.010 - - QHG53912
OrthoDB 1 1.010 - - D1033833at2759
OrthoFinder 1 1.000 - - FOG0000185
OrthoInspector 1 1.000 - - otm42462
orthoMCL 1 0.900 - - OOG6_100497
Panther 1 1.100 - - LDO PTHR19957
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1024
SonicParanoid 1 1.000 - - X2898
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1817.750

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