Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_012461.1 | Gene: | SMC3 / 853371 | SGDID: | S000003610 | Length: | 1230 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 1351 | Identity: | 300/1351 - (22%) |
---|---|---|---|
Similarity: | 562/1351 - (41%) | Gaps: | 323/1351 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 FLEYIEMENFKSYRGHIVVGPLKQF-NAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIH 89
Fly 90 GSSIGKPVSRSCYVTAKFVLNEERH---------------MDFQRAVIGGSSEYRINGESVSSST 139
Fly 140 YLNKLEKIGINVKAKNFLVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEE 204
Fly 205 TQFTYQ--KKKG-IAAERKEAKHEKMEADRYTRLQNEYNEKQVEYQLFRLFHVERDIRKFTSDLE 266
Fly 267 VRQQEVKAVEQRKEAADEILREKKKDAGKITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHC 331
Fly 332 KKKLISLQKTLETAREADNAHQSDIRKLE--KQLADVEALKKRFEDEIE-NESQRRGKSVNMEE- 392
Fly 393 ------------GLVQEYDRL-KQEAEATATQYRSELDSVNREQ---------------KSEQDT 429
Fly 430 -LDGETNRRASVEESFKKL--TLQREEAVKRR---------DKLMDHIK--SSQAALE----EQN 476
Fly 477 RIKDELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKK-------------QEVVE 528
Fly 529 LFK---KQVPGVYDRMINMCQPTHKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVE 590
Fly 591 ----TFLPLDYLQVKPLKERLRNISDPRN--VRLVFDVL----KFEPQEIERAVLFATGNALVCE 645
Fly 646 TPEDAMKVAYEIDRSRFDALALDGTFYQKSGLISGGSHDLARKAKRWDEKHMAQLKMQKERLQEE 710
Fly 711 LKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQ---LDE-FGP 771
Fly 772 KILEIERRMQNREEHIQEIKENMNNVEDKVYASFCRRLGVKNIRQYEERELVMQQERARKRAEFE 836
Fly 837 QQIDSINSQLDFEKQKDTKKNVERWERSVQDEEDALEGLKLAEARYLKEID----EDKEKMEKFK 897
Fly 898 QDKQAKKQAVDD-----MEEDISKARKDVANLAKEIHNVGSHLSAVESKIEA------------- 944
Fly 945 KKNERQNILLQ--------------AKTDCIV-----------VPLLRGSLDDAVRQSDPDVPST 984
Fly 985 SAAME-NIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDVLER----IQTPNMK-ALQK 1043
Fly 1044 LDAVTEKVQSTNEEFENARKKAKRAKAAFERV------------KNERSSRFVACCQHISDAIDG 1096
Fly 1097 IYKKLARNEAAQAYIGPDNPEEPYLDGINYNCVAPGKRFQPMN--NLSGGEKTIAALALLFSTHS 1159
Fly 1160 FHPAPFFVLDEIDAALDNTNIGKVASYIRDHTTNLQTIVISLKEEFYGHAD 1210 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 300/1351 (22%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 41/159 (26%) | ||
SMC_hinge | 535..653 | CDD:214944 | 28/127 (22%) | ||
DUF4700 | <697..>810 | CDD:292399 | 24/116 (21%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 28/83 (34%) | ||
SMC3 | NP_012461.1 | Smc | 1..1221 | CDD:224117 | 300/1351 (22%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |