Protein Alignment SMC1 and AT3G28925

DIOPT Version :10

• Sequence 1: NP_651211.2
• Gene: SMC1 / 42853
• FlyBaseID: FBgn0040283
• Length: 1238
• Species: Drosophila melanogaster
• Sequence 2: NP_683601.1
• Gene: AT3G28925 / 822528
• AraportID: AT3G28925
• Length: 247
• Species: Arabidopsis thaliana
• Alignment Length: 278
• Identity: 52/278 - (18%)
• Similarity: 105/278 - (37%)
• Gaps: 89/278 - (32%)

  Fly   693 DEKHMAQLKMQKERLQEELKEL----VKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSIS 753
            |::.||....:.:...:|||||    ||..::|..|...|...||               :||.|
plant     4 DDEPMAPNPKKIDESNKELKELESVHVKHKKRQEMLRNRELSDKG---------------RKSCS 53

  Fly   754 QYDNQL-QQVQSQLDEFGPKI-LEIERRMQNREEHIQEIKENMNNVE----------------DK 800
               |.| :.::.:..|.|.:: |..|.:.::|::....:.|..::.|                :|
plant    54 ---NHLYESMKQRSSESGKEVKLGCEEQKKHRKKKTMSMSEKRHHDEKDPRRSLEVAGSSDGWNK 115

  Fly   801 VYASFC-----------------RRLGVKNI-----RQYEERELVMQQERARKRA-------EFE 836
            ...:.|                 .|..:||:     :|.::| |:...:..|:||       :||
plant   116 TNITCCGFGSGVITGFGLEPPDGLRAQMKNVFLVACKQPDKR-LLSSNQLIRQRALHMVGTEKFE 179

  Fly   837 QQIDSINSQLDFEKQKDTKKNVERWERSVQDEEDALEGLKLAEARYLKEIDEDKEKMEKFKQDKQ 901
            :.:.:::..| |||.                  ..:.|..:..:..:..:...:||:....:..:
plant   180 ELVVTLDGAL-FEKY------------------GTMSGDSIELSNIVDMLSNIREKIPNAVRQYR 225

  Fly   902 AKKQAVDDMEEDISKARK 919
            |.:..|..:|..::||::
plant   226 AAENKVSHLEMGLAKAKE 243

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SMC1	NP_651211.2	SMC_N	26..1222	CDD:481474	52/278 (19%)
AT3G28925	NP_683601.1	None