Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_011531409.1 | Gene: | SMC6 / 79677 | HGNCID: | 20466 | Length: | 1110 | Species: | Homo sapiens |
Alignment Length: | 1325 | Identity: | 265/1325 - (20%) |
---|---|---|---|
Similarity: | 468/1325 - (35%) | Gaps: | 460/1325 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 4 EDDDVAQRVATAPVRKPDDETAFLEYIEMENFKSYRGHIVVGPLK---QFNAVIGPNGSGKSNFM 65
Fly 66 DAISFVMG------EKTSSLR--VK--------------RLNDLIHGSSIGKPVSRSCYVTAKFV 108
Fly 109 LNEERHMDFQRAVIGGSSEYRI---NGESVSSSTYLNKLEKIGI----NVKAKN---FLVFQGAV 163
Fly 164 ENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKGIAAERKEAKHEKME 228
Fly 229 ADRYTRLQNEYNEKQVEYQLFRLFHVERDIRKFTSDLEVRQQE-----VKAVEQRKEAADEILRE 288
Fly 289 KKKDAGKITRD-LAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLISLQKTLETAREADNAH 352
Fly 353 QSDIRKLEKQLADVEALKKRFEDEIE---NESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYRS 414
Fly 415 ELDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVK----RRDKLMDHIKSSQAALEEQ 475
Fly 476 NRIKDELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQVPGVYDR 540
Fly 541 MINMCQPTHKRYN-----------------VAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLE 588
Fly 589 VETFLPLDYLQVKPLKERLRNISDPRNVRLVFDV---LKFEPQ--------EIERAVLFATGNAL 642
Fly 643 V----------------------CETPEDAMKVAYEIDRSRFDALALDGTFYQKSGL-------- 677
Fly 678 ----ISGGSHDLARK------------AKRWDEKHMAQLKMQKERLQEELKELVKKSRKQSELAT 726
Fly 727 VESQIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQEIK 791
Fly 792 ENMNNVEDKVYASFCRRLGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDF-EKQKDTK 855
Fly 856 KNVER-WERSVQDEEDALEGLKLAEARYLKEID-EDKEKMEKFKQDKQAKKQAVDDMEEDISKAR 918
Fly 919 KDVANLAKEIHNVGSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGSLDDAVRQSDPDVPS 983
Fly 984 TSAAMENIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDVLERIQTPNMKALQKLDAVT 1048
Fly 1049 EKVQSTNEEFENARKKAK-----------------RAKAAFERVKNERSSRFVACCQHISDAIDG 1096
Fly 1097 IYKKLARNEAAQAYIGPDNPEEPYLDGINYN---CVAPGK----RFQPMNNLSGGEKTIAALALL 1154
Fly 1155 FSTHSFHPAPFFVLDEIDAALDNTN 1179 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 261/1303 (20%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 44/178 (25%) | ||
SMC_hinge | 535..653 | CDD:214944 | 25/167 (15%) | ||
DUF4700 | <697..>810 | CDD:292399 | 27/112 (24%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 19/54 (35%) | ||
SMC6 | XP_011531409.1 | Smc | 48..1088 | CDD:224117 | 261/1302 (20%) |
ABC_SMC6_euk | 48..>204 | CDD:213243 | 44/179 (25%) | ||
Fib_alpha | <662..742 | CDD:285864 | 24/95 (25%) | ||
DUF5098 | 701..>835 | CDD:293628 | 39/187 (21%) | ||
ABC_SMC6_euk | <996..1094 | CDD:213243 | 17/49 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |