| Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_598547.1 | Gene: | Smc4 / 70099 | MGIID: | 1917349 | Length: | 1286 | Species: | Mus musculus |
| Alignment Length: | 1355 | Identity: | 328/1355 - (24%) |
|---|---|---|---|
| Similarity: | 600/1355 - (44%) | Gaps: | 263/1355 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 3 EEDDDVAQRVATAPVRKPDDE----------------------------TAFLEYIEMENFKSYR 39
Fly 40 GHIVVGPL-KQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIHGSSIGKPVSRSCYV 103
Fly 104 TAKF------------VLNEERHMDFQRAVIGGSSEYRINGESVSSSTYLNKLEKIGINVKAKNF 156
Fly 157 LVFQGAVENIAMKTPKERT-------ALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKG 214
Fly 215 IAAERKEAKHEKMEADRYTRLQNEYNEKQVEYQLFRLFHVERDIRKFTSDLEVRQQEVKAVEQRK 279
Fly 280 EAADEILREKK---KDAGKITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLISLQKT 341
Fly 342 LETAREADNAHQSDIRKLEKQLADVEALKKRFEDEIENESQRRGKSVNM-----EEGLVQEYDRL 401
Fly 402 KQEAEATATQYRSELDSVNREQKSEQDTLDG------ETNRRASVEESFKKLTLQREE-AVKRRD 459
Fly 460 KLMDHIKSSQAALEEQNRIKDELRRDVGTSKEKIAEKQRELE--------------DVRDQLGDA 510
Fly 511 KSDKHEDARRKKKQEVVELFKK--QVPGVYDRMINMCQPTHKRYNVAVTKVLGKFMEAIIVDTEK 573
Fly 574 TARHCIQILKEQMLEVETFLPLDYLQVKPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFAT 638
Fly 639 GNALVCETPEDAMKVAYEIDRSRFDALALDGTFYQKSGLISGGSHDLAR---------------- 687
Fly 688 -KAKRWDEKHMAQ-LKMQKERLQEELKELVKKSR-----KQSELATVESQIKGLENRLKYSMVDL 745
Fly 746 ESSKKSISQYDNQLQQVQSQLDEFGPKILEIERRMQN-REEHIQEIKENMNNVED---KVYASFC 806
Fly 807 RRLGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQKDTKKNVERWERSVQDEEDA 871
Fly 872 LEGLKLAEARYLKEIDEDKEKMEKFKQDKQAKKQAVDDMEEDISKARKDVANLAKEIHNVGSHLS 936
Fly 937 AVESKIEAKKNERQNILLQAKT----------DCIVVPLLRGSLDDAVRQSDPDVPSTSAAMENI 991
Fly 992 IEVDYSSLPREYTKLK----DDSAFKKTHEMLQKDLQ---------SKLDVLE---RIQTPNMKA 1040
Fly 1041 L----QKLDAVTEKVQSTNEEFENARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYKKL 1101
Fly 1102 ARNEAAQAYIGPD------NPEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSF 1160
Fly 1161 HPAPFFVLDEIDAALDNTNIGKVASYIRDHTTNLQTIVISLKEEFYGHADALVGI 1215 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 323/1304 (25%) |
| ABC_SMC1_euk | 27..>171 | CDD:213242 | 58/156 (37%) | ||
| SMC_hinge | 535..653 | CDD:214944 | 33/117 (28%) | ||
| DUF4700 | <697..>810 | CDD:292399 | 26/122 (21%) | ||
| ABC_SMC1_euk | <1130..1232 | CDD:213242 | 41/86 (48%) | ||
| Smc4 | NP_598547.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..51 | 4/20 (20%) | |
| SMC_N | 81..1272 | CDD:308206 | 323/1304 (25%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| Isobase | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 2 | 1.810 | |||||