Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_079971.2 | Gene: | Smc6 / 67241 | MGIID: | 1914491 | Length: | 1097 | Species: | Mus musculus |
Alignment Length: | 1232 | Identity: | 248/1232 - (20%) |
---|---|---|---|
Similarity: | 468/1232 - (37%) | Gaps: | 325/1232 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 23 ETAFLEYIEMENFKSYRGHIVVGPLK---QFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRL 84
Fly 85 NDLIHGSSIGKPVSRSCYVTAKFVLNEERHMDFQRAVIG-GSSEYRIN--GESV---------SS 137
Fly 138 STYLNKLEKIGINVKAKNFLV-----FQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQE 197
Fly 198 MIVAEEETQFTYQKKKGIAAERKEAKHEKME--ADRYTRLQNEYNEKQVEYQLFRLFHVERDIRK 260
Fly 261 FTSDLEVRQQE-----VKAVEQRKEAADEILREKKKDAGKITRDLAKIDQEIREFETQMNKRRPL 320
Fly 321 YIKAKEKVTHCKKKLISLQKTLETAREADNAHQSDIRKLEKQLADVEALKKRFEDE--IENESQR 383
Fly 384 RGKSVNMEEGLVQEYDRLKQEAEATATQYRSELDSVNREQKSEQDTLDGETNRRASVEESFKKLT 448
Fly 449 LQREEAVKRRDKLMDHIKSSQA-----ALEEQNRIKDELRRDVGTSKEKIAEKQRELEDVRDQLG 508
Fly 509 DAKSDKHEDARRKKKQEVVELFKKQVPGV---YDRMINMCQPTHKRYNVAVTKVLGKFMEAIIVD 570
Fly 571 TEKTARHCIQILKEQM-LEVETFLPLDYLQVKPLKER--LRNISDPRNVRLVFDVLKFEPQEIER 632
Fly 633 AVLFATGNALVCETPEDA----MKVAYEID-RSRFDALALDGTFYQKSGLISGGSHDLARKAKRW 692
Fly 693 DEKHMAQLKMQKERLQEELKEL-------VKKSRKQSELAT--------VESQIKGLENRLKYSM 742
Fly 743 VDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQ-EIKENMNNVEDKVYASFC 806
Fly 807 RRLGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQKDTKKNVERWERSVQDEEDA 871
Fly 872 LEGLKLAEARYLKEIDEDKEKMEKFKQDKQAK-KQAVDDMEEDISKARKDVANLAKEIHNVGSHL 935
Fly 936 SAVESK---IEAKKNERQNILLQAKTDC---IVVPLLRGSLDDAVRQSDPDVPSTSAAMENIIEV 994
Fly 995 DYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDVLERIQTPNMKALQKLDAVTEKVQSTNEEFE 1059
Fly 1060 NARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYKKLARNEAAQAYIGPDNPEEPYLDGI 1124
Fly 1125 NYN---CVAPGK----RFQPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTN 1179 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 247/1229 (20%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 41/163 (25%) | ||
SMC_hinge | 535..653 | CDD:214944 | 24/127 (19%) | ||
DUF4700 | <697..>810 | CDD:292399 | 27/128 (21%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 19/54 (35%) | ||
Smc6 | NP_079971.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..32 | ||
Smc | 54..1075 | CDD:224117 | 247/1228 (20%) | ||
ABC_SMC6_euk | 54..>210 | CDD:213243 | 43/177 (24%) | ||
Flexible hinge | 458..667 | 50/263 (19%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 813..839 | 7/45 (16%) | |||
ABC_SMC6_euk | <983..1081 | CDD:213243 | 17/49 (35%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1078..1097 | ||||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |