| Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_001155103.1 | Gene: | smc1a / 559665 | ZFINID: | ZDB-GENE-090506-9 | Length: | 1232 | Species: | Danio rerio |
| Alignment Length: | 1228 | Identity: | 599/1228 - (48%) |
|---|---|---|---|
| Similarity: | 857/1228 - (69%) | Gaps: | 21/1228 - (1%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 26 FLEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIHG 90
Fly 91 SSIGKPVSRSCYVTAKFVLNEERHMDFQRAVIGGSSEYRINGESVSSSTYLNKLEKIGINVKAKN 155
Fly 156 FLVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKGIAAERK 220
Fly 221 EAKHEKMEADRYTRLQNEYNEKQVEYQLFRLFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEI 285
Fly 286 LREKKKDAGKITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLISLQKTLETAREADN 350
Fly 351 AHQSDIRKLEKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYRSE 415
Fly 416 LDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKRRDKLMDHIKSSQAALEEQNRIKD 480
Fly 481 ELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQVPG-VYDRMINM 544
Fly 545 CQPTHKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVETFLPLDYLQVKPLKERLRN 609
Fly 610 ISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVCETPEDAMKVAYEIDRSRFDALALDGTFYQK 674
Fly 675 SGLISGGSHDLARKAKRWDEKHMAQLKMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLK 739
Fly 740 YSMVDLESSK-KSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQEIKENMNNVEDKVYA 803
Fly 804 SFCRRLGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQ--KDTKKNVERWERSVQ 866
Fly 867 DEEDALEGLKLAEARYLKEIDEDKEKMEKFKQDKQAKKQAVDDMEEDISKARKDVANLAKEIHNV 931
Fly 932 GSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGSLDDAVRQ-----------SDPDVPSTS 985
Fly 986 AAMENIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDVLERIQTPNMKALQKLDAVTEK 1050
Fly 1051 VQSTNEEFENARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYKKLARNEAAQAYIGPDN 1115
Fly 1116 PEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTNI 1180
Fly 1181 GKVASYIRDHTT-NLQTIVISLKEEFYGHADALVGITPGEGDCLVSNVYIMDLTTFED 1237 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 590/1205 (49%) |
| ABC_SMC1_euk | 27..>171 | CDD:213242 | 85/143 (59%) | ||
| SMC_hinge | 535..653 | CDD:214944 | 72/118 (61%) | ||
| DUF4700 | <697..>810 | CDD:292399 | 50/113 (44%) | ||
| ABC_SMC1_euk | <1130..1232 | CDD:213242 | 73/102 (72%) | ||
| smc1a | NP_001155103.1 | SMC_N | 3..1208 | CDD:280601 | 591/1209 (49%) |
| ABC_SMC1_euk | 4..>148 | CDD:213242 | 85/143 (59%) | ||
| SMC_hinge | 513..628 | CDD:214944 | 71/117 (61%) | ||
| ABC_SMC1_euk | <1117..1220 | CDD:213242 | 73/102 (72%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
| Hieranoid | 1 | 1.000 | - | - | ||
| Homologene | 1 | 1.000 | - | - | H4597 | |
| Inparanoid | 1 | 1.050 | 1165 | 1.000 | Inparanoid score | I195 |
| OMA | 1 | 1.010 | - | - | QHG53603 | |
| OrthoDB | 1 | 1.010 | - | - | D326079at2759 | |
| OrthoFinder | 1 | 1.000 | - | - | FOG0001963 | |
| OrthoInspector | 1 | 1.000 | - | - | otm24814 | |
| orthoMCL | 1 | 0.900 | - | - | OOG6_101499 | |
| Panther | 1 | 1.100 | - | - | LDO | PTHR18937 |
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 1 | 1.000 | - | - | X1284 | |
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 1 | 0.960 | - | - | ||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 14 | 13.840 | |||||