Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001121806.1 | Gene: | si:dkey-119f1.1 / 557127 | ZFINID: | ZDB-GENE-070705-287 | Length: | 1090 | Species: | Danio rerio |
Alignment Length: | 1296 | Identity: | 260/1296 - (20%) |
---|---|---|---|
Similarity: | 460/1296 - (35%) | Gaps: | 407/1296 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 2 TEED---------DDVAQRVATAPVRKPDDETAFLEYIEMENFKSYRGHIVVGPL---KQFNAVI 54
Fly 55 GPNGSGKSNFMDAISFVMGEKT-SSLRVKRLNDLIHGSSIGKPVS-------RSCYVTAKFVLNE 111
Fly 112 ERHMDFQRAVIGGSS---EYRINGESVSSSTYLNKLEK-IGINVKA-KNFLV-----FQGAVENI 166
Fly 167 AMKTPKERTALFEEISGSG-------------LLKDDYNRLKQEMIVAEEETQFTYQKKKGIAAE 218
Fly 219 RKEAKHEKMEADRYTRL------QNEYNE--KQVEYQLFRLFHVERDIRKFTSDLEVRQQEVKAV 275
Fly 276 EQRKEAADEILRE---KKKDAGKITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLIS 337
Fly 338 LQKTLETAREADNAHQSDIRKLEKQLADVEALKKRFEDEIEN--------ESQRRGKSVN----- 389
Fly 390 MEE------GLVQEYDRLKQEAEATATQYRSELDSVNREQKSEQDTLDGETNRRASVEESFKKLT 448
Fly 449 LQREEAVKRRDKLMDHIKSSQAALEEQN-----------------RIKDELRRDVGTSKEKIAE- 495
Fly 496 -----------KQRELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQVPGVYDRMINMCQPTH 549
Fly 550 KRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVETFLPLDYLQVKPLKERLRNISD-- 612
Fly 613 ---PRNVRLVFD-------VLKFEPQEIERAVLFATGNALVCETPEDA--MKVAYEIDRSRFDAL 665
Fly 666 ALDGTFYQKSGLISGGSHDLARKAKRWDEKHMAQLKMQKERLQEELKELVKKSRKQSE-LATVES 729
Fly 730 QIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQEIKENM 794
Fly 795 NNVEDKVYASFCRRLGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQKDTKKNVE 859
Fly 860 RWERSVQDEEDALEGLKLAEARYLKEIDEDKEKMEKFKQDKQAKKQAVDDMEEDISKARKDVANL 924
Fly 925 AKEIHNVGSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGSLDDAVRQSDPDVPSTSAAME 989
Fly 990 NIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDVLERIQTPNMKALQKLDAVTEKVQST 1054
Fly 1055 NEEFENARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYKKLARNEAAQAYIGPDNPEEP 1119
Fly 1120 YLDGINYNCVAPGKR-FQPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTN 1179 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 253/1263 (20%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 45/164 (27%) | ||
SMC_hinge | 535..653 | CDD:214944 | 23/131 (18%) | ||
DUF4700 | <697..>810 | CDD:292399 | 28/113 (25%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 17/51 (33%) | ||
si:dkey-119f1.1 | NP_001121806.1 | Smc | 52..1074 | CDD:224117 | 253/1262 (20%) |
ABC_SMC6_euk | 52..>208 | CDD:213243 | 48/178 (27%) | ||
TBPIP | <241..319 | CDD:284512 | 17/88 (19%) | ||
Laminin_II | 319..>396 | CDD:283628 | 21/90 (23%) | ||
ABC_SMC6_euk | <982..1077 | CDD:213243 | 17/49 (35%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |