Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_997975.2 | Gene: | smc1al / 403060 | ZFINID: | ZDB-GENE-040426-57 | Length: | 1233 | Species: | Danio rerio |
Alignment Length: | 1228 | Identity: | 599/1228 - (48%) |
---|---|---|---|
Similarity: | 856/1228 - (69%) | Gaps: | 20/1228 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 FLEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIHG 90
Fly 91 SSIGKPVSRSCYVTAKFVLNEERHMDFQRAVIGGSSEYRINGESVSSSTYLNKLEKIGINVKAKN 155
Fly 156 FLVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKGIAAERK 220
Fly 221 EAKHEKMEADRYTRLQNEYNEKQVEYQLFRLFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEI 285
Fly 286 LREKKKDAGKITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLISLQKTLETAREADN 350
Fly 351 AHQSDIRKLEKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYRSE 415
Fly 416 LDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKRRDKLMDHIKSSQAALEEQNRIKD 480
Fly 481 ELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQVPG-VYDRMINM 544
Fly 545 CQPTHKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVETFLPLDYLQVKPLKERLRN 609
Fly 610 ISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVCETPEDAMKVAYEIDRSRFDALALDGTFYQK 674
Fly 675 SGLISGGSHDLARKAKRWDEKHMAQLKMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLK 739
Fly 740 YSMVDLESSK-KSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQEIKENMNNVEDKVYA 803
Fly 804 SFCRRLGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQ--KDTKKNVERWERSVQ 866
Fly 867 DEEDALEGLKLAEARYLKEIDEDKEKMEKFKQDKQAKKQAVDDMEEDISKARKDVANLAKEIHNV 931
Fly 932 GSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGSLDDAVRQ-----------SDPDVPSTS 985
Fly 986 AAMENIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDVLERIQTPNMKALQKLDAVTEK 1050
Fly 1051 VQSTNEEFENARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYKKLARNEAAQAYIGPDN 1115
Fly 1116 PEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTNI 1180
Fly 1181 GKVASYIRDHTT-NLQTIVISLKEEFYGHADALVGITPGEGDCLVSNVYIMDLTTFED 1237 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 590/1205 (49%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 85/143 (59%) | ||
SMC_hinge | 535..653 | CDD:214944 | 71/118 (60%) | ||
DUF4700 | <697..>810 | CDD:292399 | 49/113 (43%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 73/102 (72%) | ||
smc1al | NP_997975.2 | SMC_N | 3..1209 | CDD:280601 | 591/1209 (49%) |
ABC_SMC1_euk | 4..>148 | CDD:213242 | 85/143 (59%) | ||
SMC_hinge | 513..628 | CDD:214944 | 70/117 (60%) | ||
ABC_SMC1_euk | <1118..1221 | CDD:213242 | 73/102 (72%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H4597 | |
Inparanoid | 1 | 1.050 | 1165 | 1.000 | Inparanoid score | I195 |
OMA | 1 | 1.010 | - | - | QHG53603 | |
OrthoDB | 1 | 1.010 | - | - | D326079at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001963 | |
OrthoInspector | 1 | 1.000 | - | - | otm24814 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101499 | |
Panther | 1 | 1.100 | - | - | O | PTHR18937 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1351 |
SonicParanoid | 1 | 1.000 | - | - | X1284 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.870 |