Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_523374.2 | Gene: | SMC3 / 32627 | FlyBaseID: | FBgn0015615 | Length: | 1200 | Species: | Drosophila melanogaster |
Alignment Length: | 1336 | Identity: | 317/1336 - (23%) |
---|---|---|---|
Similarity: | 565/1336 - (42%) | Gaps: | 313/1336 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 LEYIEMENFKSYRGHIVVGPL-KQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIHG 90
Fly 91 SSIGKPVSRSCYVTAKFVLNEER-HMD----FQRAVIGG-SSEYRINGESVSSSTYLNKLEKIGI 149
Fly 150 NVKAKNFLVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKG 214
Fly 215 IAAERKEAKHEKMEADRYTRLQNEYNEKQVEYQLFRLFHVERDIRKFTSDLEVRQQEVKAVEQRK 279
Fly 280 EAADEILREKKKDAGKITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLISLQKTLET 344
Fly 345 AREADNAHQSDIRKL--EKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEAEA 407
Fly 408 TATQYRSELDSVN-------------------REQK-SEQDTLDGETNRRASVEESFKKLTLQRE 452
Fly 453 EAVKR-RDKLMDHIKSSQAALEEQNRIKDELRRDVGTSK---EKIAEKQRELEDVRDQLGDAKSD 513
Fly 514 KHEDARRKKKQEVV---ELFKKQVPGVYDRMINMCQPTHK----RYNVA---------------V 556
Fly 557 TKVLGKFME------------------------AIIVDTEKTA-----RHCI-------QILKEQ 585
Fly 586 ML-----EVETFLPLDYLQVK----PLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFATGNA 641
Fly 642 LVCETPEDAMKVAYEIDRSRFDALALDGTFYQKSGLISGGSHDLARKAKRWDEKHMAQLKMQKER 706
Fly 707 LQ--EELKELVKKSRKQSELATVESQIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQLDEF 769
Fly 770 GPKILEIERRMQNREEHIQEIK---ENMNNVEDKVYASFCRRLGVKNIRQYEERELVMQQERARK 831
Fly 832 RAEFEQQIDSINSQLDFEKQKDTKKNV--------------ERWERSVQDEEDALEGLKL----A 878
Fly 879 EARYLKEIDEDKEKMEK-FKQDKQAKKQAVDDMEEDISKARKDVANLAKEIHNVGSHLSAVESKI 942
Fly 943 EAKKNERQNILLQAKTDCI-------VVPLLRGSLDDAVRQSDPDVPSTSAAMENIIEVDYSSLP 1000
Fly 1001 REYTKLKDDS-----------AFKKTHEMLQKDLQSKLDVLER-----IQTPNMKALQKLDAVTE 1049
Fly 1050 KVQSTNEEFENARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYKKLARNEAAQAYIGPD 1114
Fly 1115 NPEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTN 1179
Fly 1180 IGKVASYIRDHTTNLQTIVISLKEEFYGHADALVGI 1215 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 317/1336 (24%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 50/150 (33%) | ||
SMC_hinge | 535..653 | CDD:214944 | 45/181 (25%) | ||
DUF4700 | <697..>810 | CDD:292399 | 21/117 (18%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 32/86 (37%) | ||
SMC3 | NP_523374.2 | SMC_N | 2..1180 | CDD:280601 | 317/1336 (24%) |
ABC_SMC3_euk | 3..>159 | CDD:213239 | 51/157 (32%) | ||
SMC_hinge | 533..643 | CDD:214944 | 32/120 (27%) | ||
TMPIT | 678..>760 | CDD:285135 | 16/87 (18%) | ||
CHD5 | <780..>822 | CDD:282299 | 4/44 (9%) | ||
P-loop_NTPase | <1088..1182 | CDD:304359 | 32/85 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45464470 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.740 |