Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_955836.2 | Gene: | smc2 / 321452 | ZFINID: | ZDB-GENE-030131-105 | Length: | 1199 | Species: | Danio rerio |
Alignment Length: | 1316 | Identity: | 302/1316 - (22%) |
---|---|---|---|
Similarity: | 551/1316 - (41%) | Gaps: | 290/1316 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 26 FLEYIEMENFKSYRGHIVVGPLKQ-FNAVIGPNGSGKSNFMDAISFVMG-EKTSSLRVKRLNDLI 88
Fly 89 HGSSIGKPVSRSCYVT------AKFVLNEERHMDF---QRAVIGGSSEYRINGESVSSSTYLNKL 144
Fly 145 EKIGINVKAKNFLVFQGAVENIAMKTPKERTALFEEISGSGLL------------KDDYNRLKQE 197
Fly 198 MIVAEEETQFTYQKKKGIAAERKEAKHEKMEADRYTRLQNEY------------NEKQVEYQLFR 250
Fly 251 LFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEILREKKKDAGKITRDLAKIDQEIREFETQMN 315
Fly 316 KRRPLYIKAKEKVTHCKKKLISLQKTLETAREADNAHQSDIRKLEKQLADVEALKKRFEDEIENE 380
Fly 381 SQR-----RGKSVNMEEG---------LVQEYDRLKQEAEATATQYR------------SELDSV 419
Fly 420 NREQKSEQDTLDGETNRRASVEESFKKLTLQ--REEAVKRRDKLMDHIKSSQAALEEQNRIKDEL 482
Fly 483 RRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQVPGVYDRMINMCQP 547
Fly 548 THKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVETFLPLDYLQVKPLKERL----R 608
Fly 609 NISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVCETPEDAMKVAYEIDRSRFDALALDGTFYQ 673
Fly 674 KSGLISGGSHDLARKAKRWDEKHMAQLKMQKERLQEELKELVKKSRKQSELATVESQIKG----- 733
Fly 734 -------------------LENRLKYS-----MVDLESSKKSISQYDNQLQ---QVQSQLDEFGP 771
Fly 772 KILEIERRMQN----REEHIQEIKENMNNVEDKVYASFCRRLGVKNIRQYEERELVMQ-QERARK 831
Fly 832 RAEFEQQIDSINSQLDFEKQKDTKKNVERWERSVQDEEDAL----EGLK------LAEARYLKEI 886
Fly 887 DEDKEKMEKFKQDKQAKKQAVDDMEEDISKARKDVAN--------------LAKEIHNVGSHLSA 937
Fly 938 VESKIEAKKNERQNILLQAKTDCIVVPLLRGSLDDAVRQSDPDVPSTSAAMENIIEVDYSSLPRE 1002
Fly 1003 YTKLKDDSAFKKTHEMLQKDLQSKLDVLERIQTPNMKALQKLDAVTEKVQSTNEEFENARKKAKR 1067
Fly 1068 AKAAFERVKNERSSRFVACCQHISDAIDGIYKKLARNEAAQAYIGPDNPEEPYLDGINYNCVAPG 1132
Fly 1133 KRF-QPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTNIGKVASYIRDHTTNLQT 1196
Fly 1197 IVISLKEEFYGHADAL 1212 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 302/1316 (23%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 45/154 (29%) | ||
SMC_hinge | 535..653 | CDD:214944 | 24/121 (20%) | ||
DUF4700 | <697..>810 | CDD:292399 | 35/148 (24%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 31/84 (37%) | ||
smc2 | NP_955836.2 | Smc | 1..1170 | CDD:224117 | 302/1316 (23%) |
ABC_SMC2_euk | 1..>156 | CDD:213240 | 45/153 (29%) | ||
L_lactis_ph-MCP | 252..>465 | CDD:115336 | 45/227 (20%) | ||
SMC_hinge | 522..639 | CDD:214944 | 28/134 (21%) | ||
DUF4200 | 740..841 | CDD:290574 | 30/107 (28%) | ||
P-loop_NTPase | <1074..1169 | CDD:304359 | 30/83 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.910 |