| Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_775360.2 | Gene: | smc4 / 192332 | ZFINID: | ZDB-GENE-020419-21 | Length: | 1289 | Species: | Danio rerio |
| Alignment Length: | 1340 | Identity: | 340/1340 - (25%) |
|---|---|---|---|
| Similarity: | 614/1340 - (45%) | Gaps: | 263/1340 - (19%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 6 DDVAQRVATAP----VRKPDDETAFLEYIEMENFKSYRGHIVVGPL-KQFNAVIGPNGSGKSNFM 65
Fly 66 DAISFVMGEKTSSLRVKRLNDLIHGSSIGKPVSRSCYVTAKF--VLNEERHMDFQRAVIGGSSEY 128
Fly 129 --RINGESVSSSTYLNK-----------LEKIGINVKAKNFLVFQGAVENIAMKTPKERT----- 175
Fly 176 --ALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKGIAAERKEAKHEKMEADRYTRLQNE 238
Fly 239 YNEKQVEYQLFRLFHVERDIRKFTSDLEVRQQEVKAVEQRKEAAD------EILREKKKDAGKIT 297
Fly 298 RDLAKIDQEIREFETQMNKRRPL---YIKAKEKVTHCKKKLISLQKTLETARE------------ 347
Fly 348 -----ADNAHQSDIRK---LEKQ-LADV-EALKKRF----EDEIENESQ--RRGKSVNMEEGLVQ 396
Fly 397 EYDRLKQEAEATATQYRSELDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKRRDKL 461
Fly 462 MDHIKSSQAALEEQNRIKDELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKKQEV 526
Fly 527 VELFKK--QVPGVYDRMINMCQPTHKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEV 589
Fly 590 ETFLPLDYLQVKPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVCETPEDAMKVA 654
Fly 655 YEIDRSRFDALALDGTFYQKSGLISGGSHDLARKAKRWDEKHMAQLKMQKERL---------QEE 710
Fly 711 LKELVKKSRKQ-SELATVESQIKGLENRLKYSMVDLESSKKSISQYDNQLQQVQSQLDEFGPKIL 774
Fly 775 EIE-------------RRMQNREEHIQEIKENMNNVEDKVYASFCRRLGVKNIRQYEERELVMQQ 826
Fly 827 ERARKRAEFEQQIDSINSQLD-------------------FEKQKDTKKNVERWERSVQDEEDAL 872
Fly 873 EGLKLAEARYLKEIDEDK-EKMEKFKQDKQAKKQAVDD----------MEEDISKARKDVANLAK 926
Fly 927 EIHNVGSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGSLDDAVRQ-SDPDVPSTSAAMEN 990
Fly 991 IIEVDYSSLPREYTKLKDD----SAFKKTHEMLQKDLQSKLDVLERIQTPNMKALQKLDAVTEKV 1051
Fly 1052 QSTNEEFENARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYKKLARNEAAQAYIGPD-- 1114
Fly 1115 ----NPEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAAL 1175
Fly 1176 DNTNIGKVASYIRDHTTNLQTIVISLKEEFYGHADALVGI 1215 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 337/1316 (26%) |
| ABC_SMC1_euk | 27..>171 | CDD:213242 | 64/159 (40%) | ||
| SMC_hinge | 535..653 | CDD:214944 | 36/117 (31%) | ||
| DUF4700 | <697..>810 | CDD:292399 | 24/135 (18%) | ||
| ABC_SMC1_euk | <1130..1232 | CDD:213242 | 43/86 (50%) | ||
| smc4 | NP_775360.2 | ABC_SMC4_euk | 81..>240 | CDD:213241 | 64/162 (40%) |
| SMC_N | 82..1273 | CDD:280601 | 337/1316 (26%) | ||
| DUF4349 | <274..435 | CDD:305044 | 39/169 (23%) | ||
| SMC_hinge | 612..726 | CDD:214944 | 36/117 (31%) | ||
| MIT_CorA-like | <866..1025 | CDD:294313 | 33/177 (19%) | ||
| ABC_SMC4_euk | <1180..1274 | CDD:213241 | 43/85 (51%) |
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 1 | 1.010 | - | - | D326079at2759 | |
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 1 | 0.910 | - | - | ||
| RoundUp | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 1 | 1.000 | - | - | ||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| ZFIN | 0 | 0.000 | Not matched by this tool. | |||
| 4 | 3.820 | |||||