Protein Alignment SMC1 and C44C10.5

DIOPT Version :10

• Sequence 1: NP_651211.2
• Gene: SMC1 / 42853
• FlyBaseID: FBgn0040283
• Length: 1238
• Species: Drosophila melanogaster
• Sequence 2: NP_001359562.1
• Gene: C44C10.5 / 183454
• WormBaseID: WBGene00008086
• Length: 277
• Species: Caenorhabditis elegans
• Alignment Length: 297
• Identity: 60/297 - (20%)
• Similarity: 128/297 - (43%)
• Gaps: 52/297 - (17%)

  Fly   852 KDTKKNVE---RWERSVQDEEDALEGLKL-------AEARYL-KEIDEDKEKMEKFKQDKQAKKQ 905
            :::|:.||   :.:..:|.|:.....|.|       .|.:.| |::.:::.|:...|..||::|.
 Worm     3 EESKQKVEKHTKMKELIQVEQGQFISLHLYRLFLNDLERKSLEKKLTKEQVKLTNIKASKQSQKV 67

  Fly   906 AVDDMEEDISK------------ARKDVANLAKEIHNVGSHLSAVESKIEAKKNERQNILLQAKT 958
            ...|..:.|:|            :|.|..:|::|.....:.:..:|:::..::.:|:.|:..
 Worm    68 TKSDDPKAIAKQAPPAMFKVQGCSRLDGDSLSQENAEKPAIVIELENRLVQQRAQRRKIIAN--- 129

  Fly   959 DCIVVPLLRGSLDDAVRQSDPDVPSTSAAMENI-IEVDYSSLPREYTKLKDDSAFKKTH-EMLQK 1021
                           |...|.|:|:..|...:. ::.||||||.|..|..:|:...|.| ..|::
 Worm   130 ---------------VTLQDLDIPAKEAGTFSYDVKPDYSSLPDELKKESNDAETVKMHLRTLEE 179

  Fly  1022 DLQSKLD---VLERIQTPNMKALQKLDAVTEKVQSTNEEFENARKKAKRAKAAFERVKNERSSRF 1083
            .:|:..:   .:...:.|:|      ..:..:...|:.....|:.:....:|..|:||..|.:.|
 Worm   180 TIQATRNEWVAVNGAEYPDM------SNILIRFHETDSFINIAKLRTTELEAEIEQVKASRRTHF 238

  Fly  1084 VACCQHISDAIDGIYKKLARNEAAQAYIGPDNPEEPY 1120
            ......:|.::..||::::.:..:...:...|.:|||
 Worm   239 NQRLAAVSSSVSRIYREISEDPDSTVSLASSNEDEPY 275

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
SMC1	NP_651211.2	SMC_N	26..1222	CDD:481474	60/297 (20%)
C44C10.5	NP_001359562.1	None