Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001040658.2 | Gene: | him-1 / 172116 | WormBaseID: | WBGene00001860 | Length: | 1262 | Species: | Caenorhabditis elegans |
Alignment Length: | 1246 | Identity: | 496/1246 - (39%) |
---|---|---|---|
Similarity: | 753/1246 - (60%) | Gaps: | 53/1246 - (4%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIHGS 91
Fly 92 SIGKPVSRSCYVTAKFVLNEERHMDFQRAVIGGSSEYRINGESVSSSTYLNKLEKIGINVKAKNF 156
Fly 157 LVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKGIAAERKE 221
Fly 222 AKHEKMEADRYTRLQNEYNEKQVEYQLFRLFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEIL 286
Fly 287 REKKKDAGKITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLISLQKTL---ETAREA 348
Fly 349 DNAHQSDIRKLEKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYR 413
Fly 414 SELDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKRRD----KLMDHIKSSQAALEE 474
Fly 475 QNRIKDELRR---DVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQVP- 535
Fly 536 GVYDRMINMCQPTHKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVETFLPLDYLQV 600
Fly 601 KPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVCETPEDAMKVAY---EIDRSRF 662
Fly 663 DALALDGTFYQKSGLISGGSHDLARKAKRWDEKHMAQLKMQKERLQEELKELVKKSRKQSELATV 727
Fly 728 ESQIKGLENRLKYSMVDLESSKK-SISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQEIK 791
Fly 792 ENMNNVEDKVYASFCRRLGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQKDTKK 856
Fly 857 NVERWERSVQDEEDALEGLKLAEARYLKEIDEDKEKMEKFKQDKQAKKQAVDDMEEDISKARKDV 921
Fly 922 ANLA-KEIHNVGSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGSL----------DDAVR 975
Fly 976 QSD------PDVPSTSAAMENIIEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDVLERIQ 1034
Fly 1035 TPNMKALQKLDAVTEKVQSTNEEFENARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYK 1099
Fly 1100 KLARNEAAQAYIGPDNPEEPYLDGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSFHPAP 1164
Fly 1165 FFVLDEIDAALDNTNIGKVASYI----RDHTTNLQTIVISLKEEFYGHADALVGITPGEGDCLVS 1225
Fly 1226 NVYIMDLTTFE 1236 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 487/1224 (40%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 78/143 (55%) | ||
SMC_hinge | 535..653 | CDD:214944 | 60/118 (51%) | ||
DUF4700 | <697..>810 | CDD:292399 | 29/113 (26%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 73/105 (70%) | ||
him-1 | NP_001040658.2 | SMC_N | 15..1232 | CDD:280601 | 490/1232 (40%) |
ABC_SMC1_euk | 16..>160 | CDD:213242 | 78/143 (55%) | ||
Vps53_N | 232..>334 | CDD:282020 | 21/101 (21%) | ||
SMC_hinge | 523..641 | CDD:214944 | 59/117 (50%) | ||
ABC_SMC1_euk | <1137..1240 | CDD:213242 | 73/105 (70%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160167574 | |
Domainoid | 1 | 1.000 | 854 | 1.000 | Domainoid score | I19 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H4597 | |
Inparanoid | 1 | 1.050 | 868 | 1.000 | Inparanoid score | I209 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53603 | |
OrthoDB | 1 | 1.010 | - | - | D326079at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001963 | |
OrthoInspector | 1 | 1.000 | - | - | oto18192 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101499 | |
Panther | 1 | 1.100 | - | - | LDO | PTHR18937 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1351 |
SonicParanoid | 1 | 1.000 | - | - | X1284 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
15 | 14.940 |