Sequence 1: | NP_651211.2 | Gene: | SMC1 / 42853 | FlyBaseID: | FBgn0040283 | Length: | 1238 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_536718.1 | Gene: | Smc1b / 140557 | MGIID: | 2154049 | Length: | 1248 | Species: | Mus musculus |
Alignment Length: | 1223 | Identity: | 499/1223 - (40%) |
---|---|---|---|
Similarity: | 762/1223 - (62%) | Gaps: | 16/1223 - (1%) |
- Green bases have known domain annotations that are detailed below.
Fly 27 LEYIEMENFKSYRGHIVVGPLKQFNAVIGPNGSGKSNFMDAISFVMGEKTSSLRVKRLNDLIHGS 91
Fly 92 SIGKPVSRSCYVTAKFVLNEERHMDFQRAVIGGSSEYRINGESVSSSTYLNKLEKIGINVKAKNF 156
Fly 157 LVFQGAVENIAMKTPKERTALFEEISGSGLLKDDYNRLKQEMIVAEEETQFTYQKKKGIAAERKE 221
Fly 222 AKHEKMEADRYTRLQNEYNEKQVEYQLFRLFHVERDIRKFTSDLEVRQQEVKAVEQRKEAADEIL 286
Fly 287 REKKKDAGKITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLISLQKTLETAREADNA 351
Fly 352 HQSD-IRKLEKQLADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYRSE 415
Fly 416 LDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKRRDKLMDHIKSSQAALEEQNRIKD 480
Fly 481 ELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQVP-GVYDRMINM 544
Fly 545 CQPTHKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVETFLPLDYLQVKPLKERLRN 609
Fly 610 ISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVCETPEDAMKVAYEIDRSRFDALALDGTFYQK 674
Fly 675 SGLISGGSHDLARKAKRWDEKHMAQLKMQKERLQEELKELVKKSRKQSELATVESQIKGLENRLK 739
Fly 740 YSMVDLES-SKKSISQYDNQLQQVQSQLDEFGPKILEIERRMQNREEHIQEIKENMNNVEDKVYA 803
Fly 804 SFCRRLGVKNIRQYEERELVMQQERARKRAEFEQQIDSINSQLDFEKQKDTKK--NVERWERSVQ 866
Fly 867 DEEDALEGLKLAEARYLKEIDEDKEKMEKFKQDKQAKKQAVDDMEEDISKARKDVANLAKEIHNV 931
Fly 932 GSHLSAVESKIEAKKNERQNILLQAKTDCIVVPLLRGSLDDAVRQSDPDVPSTSAA-----MENI 991
Fly 992 IEVDYSSLPREYTKLKDDSAFKKTHEMLQKDLQSKLDVLERIQTPNMKALQKLDAVTEKVQSTNE 1056
Fly 1057 EFENARKKAKRAKAAFERVKNERSSRFVACCQHISDAIDGIYKKLARNEAAQAYIGPDNPEEPYL 1121
Fly 1122 DGINYNCVAPGKRFQPMNNLSGGEKTIAALALLFSTHSFHPAPFFVLDEIDAALDNTNIGKVASY 1186
Fly 1187 IRDHT-TNLQTIVISLKEEFYGHADALVGITPGEGDCLVSNVYIMDLTTFEDT 1238 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
SMC1 | NP_651211.2 | Smc | 26..1216 | CDD:224117 | 491/1199 (41%) |
ABC_SMC1_euk | 27..>171 | CDD:213242 | 81/143 (57%) | ||
SMC_hinge | 535..653 | CDD:214944 | 53/118 (45%) | ||
DUF4700 | <697..>810 | CDD:292399 | 32/113 (28%) | ||
ABC_SMC1_euk | <1130..1232 | CDD:213242 | 68/102 (67%) | ||
Smc1b | NP_536718.1 | Smc | 3..1199 | CDD:224117 | 491/1199 (41%) |
ABC_SMC1_euk | 4..>148 | CDD:213242 | 81/143 (57%) | ||
DUF342 | <421..492 | CDD:302792 | 20/70 (29%) | ||
SMC_hinge | 513..628 | CDD:214944 | 52/117 (44%) | ||
ABC_SMC1_euk | <1112..1215 | CDD:213242 | 68/102 (67%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1219..1248 | 2/3 (67%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 1151 | 1.000 | Domainoid score | I17 |
eggNOG | 1 | 0.900 | - | - | E1_COG1196 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 1171 | 1.000 | Inparanoid score | I200 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53603 | |
OrthoDB | 1 | 1.010 | - | - | D326079at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001963 | |
OrthoInspector | 1 | 1.000 | - | - | otm43758 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101499 | |
Panther | 1 | 1.100 | - | - | O | PTHR18937 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 1 | 1.000 | - | - | X1284 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.840 |