DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp68 and SSZ1

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_011931.2 Gene:SSZ1 / 856461 SGDID:S000001106 Length:538 Species:Saccharomyces cerevisiae


Alignment Length:549 Identity:160/549 - (29%)
Similarity:275/549 - (50%) Gaps:73/549 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PAIGIDLGTTYSCVG-VFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVF 65
            |.|||..|.|.|.:. :.....|::|||..|.|..||.:::...:...|..|..|:..||||::.
Yeast     4 PVIGITFGNTSSSIAYINPKNDVDVIANPDGERAIPSALSYVGEDEYHGGQALQQLIRNPKNTII 68

  Fly    66 DAKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFK---------GANKCFSPEEISSMVL 121
            :.:..||..||...:.:..          ||.|.:.|:.|         |..:..:.:|:.|..|
Yeast    69 NFRDFIGLPFDKCDVSKCA----------NGAPAVEVDGKVGFVISRGEGKEEKLTVDEVVSRHL 123

  Fly   122 TKMKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNL 186
            .::|..||.|:|:.||:||:|||..|::.|:.|.|.:.|..|:.:::.||||:||.||:......
Yeast   124 NRLKLAAEDYIGSAVKEAVLTVPTNFSEEQKTALKASAAKIGLQIVQFINEPSAALLAHAEQFPF 188

  Fly   187 KGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDL 251
            :.:.||::.|.||...|.:::.:..| :|.:.:||.|..|||::.|..||.:||.||::||:.:.
Yeast   189 EKDVNVVVADFGGIRSDAAVIAVRNG-IFTILATAHDLSLGGDNLDTELVEYFASEFQKKYQANP 252

  Fly   252 RSNPRALRRLRTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVE 316
            |.|.|:|.:|:..:...|:|||::|.|::.||:|.:|.|:::.::|.|:|.:...:|......|:
Yeast   253 RKNARSLAKLKANSSITKKTLSNATSATISIDSLADGFDYHASINRMRYELVANKVFAQFSSFVD 317

  Fly   317 KALKDAKMDKSQIHDIVLVGGSTRIPKVQNLLQ-------NFFGGKTLNLSINPDEAVAYGAAIQ 374
            ..:..|::|...|..::|.||.:..||:...|:       ...|.:..|.|.||:|..|.|||:|
Yeast   318 SVIAKAELDPLDIDAVLLTGGVSFTPKLTTNLEYTLPESVEILGPQNKNASNNPNELAASGAALQ 382

  Fly   375 AAILSGDKSSEIKDVL---LVDVAPLS--LGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQP 434
            |.::|...:.|:.:.|   :|:...|.  :|:..|.|....::...:..|.::..|......:  
Yeast   383 ARLISDYDADELAEALQPVIVNTPHLKKPIGLIGAKGEFHPVLLAETSFPVQKKLTLKQAKGD-- 445

  Fly   435 AVTIQVFEGE--------RALTKDNN----------------------VLGT--FDLTGVPPAPR 467
             ..|.|:||:        ..:.|:.|                      .|||  .:| |:..| .
Yeast   446 -FLIGVYEGDHHIEEKTLEPIPKEENAEEDDESEWSDDEPEVVREKLYTLGTKLMEL-GIKNA-N 507

  Fly   468 GVPKIDVTFDLDANGILNVTAKEQGTGNA 496
            ||   ::.|:::.:|.|.|||::..||||
Yeast   508 GV---EIIFNINKDGALRVTARDLKTGNA 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 160/549 (29%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 125/392 (32%)
SSZ1NP_011931.2 ScSsz1p_like_NBD 4..384 CDD:212674 125/390 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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