DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp68 and SSB1

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_010052.1 Gene:SSB1 / 851369 SGDID:S000002388 Length:613 Species:Saccharomyces cerevisiae


Alignment Length:608 Identity:347/608 - (57%)
Similarity:449/608 - (73%) Gaps:13/608 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDA 67
            |||||||||||||..:: ..||||||:||||.|||:||||..|||||||||||.|:||:|:||||
Yeast     9 AIGIDLGTTYSCVATYE-SSVEIIANEQGNRVTPSFVAFTPEERLIGDAAKNQAALNPRNTVFDA 72

  Fly    68 KRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYL 132
            ||||||||||..:|:|:|.||||||:.:|.|.|.|::....|.|||:|||:||||||||.|||.:
Yeast    73 KRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEISAMVLTKMKEIAEAKI 137

  Fly   133 GTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGL--DKNLKGERNVLIF 195
            |..|:.|||||||||||:|||||||||||:|:|||||||||||||:||||  .|:.| ||:||||
Yeast   138 GKKVEKAVITVPAYFNDAQRQATKDAGAISGLNVLRIINEPTAAAIAYGLGAGKSEK-ERHVLIF 201

  Fly   196 DLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRR 260
            ||||||||||:|.| .|.::.|:||:|:|||||:|||..|:.||..|||:|...|:..:.|||||
Yeast   202 DLGGGTFDVSLLHI-AGGVYTVKSTSGNTHLGGQDFDTNLLEHFKAEFKKKTGLDISDDARALRR 265

  Fly   261 LRTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMD 325
            ||||||||||||||.|:.::|:|:|::|.||.|.::|||||:|...||::||||||:.|||||:.
Yeast   266 LRTAAERAKRTLSSVTQTTVEVDSLFDGEDFESSLTRARFEDLNAALFKSTLEPVEQVLKDAKIS 330

  Fly   326 KSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSS-EIKDV 389
            ||||.::|||||||||||||.||.:||.||.|..|||||||||||||:|.|||:|..:| |.||:
Yeast   331 KSQIDEVVLVGGSTRIPKVQKLLSDFFDGKQLEKSINPDEAVAYGAAVQGAILTGQSTSDETKDL 395

  Fly   390 LLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVL 454
            ||:||||||||:...|.:...::.||:.:|..:.:||||.||||..|...|::|||...|:|.:|
Yeast   396 LLLDVAPLSLGVGMQGDMFGIVVPRNTTVPTIKRRTFTTCADNQTTVQFPVYQGERVNCKENTLL 460

  Fly   455 GTFDLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRMLSE 519
            |.|||..:|..|.|.|.::..|::||||||.|||.|:.||.:.||||.|..||||..:|::|:::
Yeast   461 GEFDLKNIPMMPAGEPVLEAIFEVDANGILKVTAVEKSTGKSSNITISNAVGRLSSEEIEKMVNQ 525

  Fly   520 AEKYAEEDERHRQRIAARNQLETYLFGVKEAAENG--GDRISAADKSSIVERCSEAMKWLDSNTT 582
            ||::...||...::..||.:||:|:..:::...:.  ..::....||.|....|:|:..|.....
Yeast   526 AEEFKAADEAFAKKHEARQRLESYVASIEQTVTDPVLSSKLKRGSKSKIEAALSDALAALQIEDP 590

  Fly   583 AEKEEYEYKLKELEQFCSPIMTK 605
            :..|     |::.|.....::||
Yeast   591 SADE-----LRKAEVGLKRVVTK 608

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 347/608 (57%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 259/377 (69%)
SSB1NP_010052.1 PTZ00009 6..575 CDD:240227 338/568 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157341916
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.640

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