DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp68 and Hspa12a

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_006527440.1 Gene:Hspa12a / 73442 MGIID:1920692 Length:695 Species:Mus musculus


Alignment Length:651 Identity:143/651 - (21%)
Similarity:228/651 - (35%) Gaps:200/651 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYS-----------CVGVFQYGKVEIIANDQG--NRTTPSYVAFTDSERL--IGDAAK 53
            :.||.|||.|           |:.|.:..:    ..|.|  |:.||:.:..|...:.  .|.|| 
Mouse    79 VAIDFGTTSSGYAYSFTKEPECIHVMRRWE----GGDPGVSNQKTPTTILLTPERKFHSFGYAA- 138

  Fly    54 NQVAMNPKNSVFDAKRLIGRRFDDSKIQEDIKHW----PFKV-INDNGKPKISVEFKGAN-KCFS 112
                               |.|.......:.|.|    .||: ::..|...:..:...|| |...
Mouse   139 -------------------RDFYHDLDPSEAKQWLYLEKFKMKLHTTGDLTMDTDLTAANGKKVK 184

  Fly   113 PEEISSMVLTKMKETAEAYL----GTTVKDA----VITVPAYFNDSQRQATKDAGAIAGI----- 164
            ..||.:..|...||.|...|    |:..:::    ||||||.:....:|..::|...||:     
Mouse   185 ALEIFAYALQYFKEQALKELSDQAGSDFENSDVRWVITVPAIWKQPAKQFMREAAYQAGLASPEN 249

  Fly   165 -NVLRIINEPTAAAL--------------------AYG-------------------------LD 183
             ..|.|..||.||::                    .|.                         |.
Mouse   250 SEQLIIALEPEAASIYCRKLRLHQMIELSSKAVVNGYSASDTVGAGFAQAKEHVRRNRQSRTFLV 314

  Fly   184 KNLKGE--------RNVLIFDLGGGTFDVSI--LTIDEGSLFEVRSTAGDTH--LGGE-DFDNRL 235
            :|:.||        ...::.|.||||.|:::  :.:.||.|.|:....|..:  ||.: :|:..|
Mouse   315 ENVIGEIWSELEEGDKYVVVDSGGGTVDLTVHQIRLPEGHLKELYKATGGPYGSLGVDYEFEKLL 379

  Fly   236 VNHFAEEFKRKYKKDLRSNPRALRRLRTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARF 300
            ...|.|:|..::|   ...|.|...|..|.|..||..:......|.|...:...|:|.|......
Mouse   380 CKIFGEDFIEQFK---IKRPAAWVDLMIAFESRKRAAAPDRTNPLNITLPFSFIDYYKKFRGHSV 441

  Fly   301 E-----------------------ELCGDLFRNTLEPVEKALKD--AKMDKSQIHDIVLVGGSTR 340
            |                       :....||:.|::.:.:.|:|  .|.:.|.:..:.||||...
Mouse   442 EHALRKSNVDFVKWSSQGMLRMSPDAMNALFKPTIDSIIEHLRDLFQKPEVSTVKFLFLVGGFAE 506

  Fly   341 IPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLVDVAPLSLGIETAG 405
            .|.:|..:|..||.| ..:.|..|..:   ..::.|:|.|...:.||    |..:||:.|:    
Mouse   507 APLLQQAVQTAFGDK-CRIIIPQDVGL---TILKGAVLFGLDPAVIK----VRRSPLTYGV---- 559

  Fly   406 GVMTKLIER--------------------NSRIPCKQS--------KTFTTYADNQPAVTIQVFE 442
            ||:.:.:|.                    :..|...||        :::|....:|..:.|.::.
Mouse   560 GVLNRYVEGKHPPEKLLVKDGTRWCTDVFDKFISADQSVALGELVKRSYTPAKPSQLVIIINIYS 624

  Fly   443 GER---ALTKDNNV--LGT--FDLTG----VPPAPRGVPKIDVTF---DLDANGILNVTAKEQGT 493
            .|.   :...|..|  .||  .||||    ..||.|.:..| :.|   ::.|..:...|:|....
Mouse   625 SEHDNVSFITDPGVKKCGTLRLDLTGSGGTAVPARREIQTI-MQFGDTEIKATAVDITTSKSVKV 688

  Fly   494 G 494
            |
Mouse   689 G 689

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 143/651 (22%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 108/492 (22%)
Hspa12aXP_006527440.1 HSPA12A_like_NBD 77..543 CDD:212685 109/494 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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