DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp68 and hspa12a.2

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:XP_003198604.1 Gene:hspa12a.2 / 559237 ZFINID:ZDB-GENE-061009-20 Length:571 Species:Danio rerio


Alignment Length:606 Identity:126/606 - (20%)
Similarity:225/606 - (37%) Gaps:151/606 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGV-FQYGKVE---IIAN---DQGNRT--TPSYVAFTDSE--RLIG-DAAKNQV 56
            |.||.||:||...: |:..:.:   :|.|   |.|..|  ||:.:.|.:.|  :..| ||.....
Zfish     8 IAIDFGTSYSGYAISFKTKQPQESILIPNWGVDYGYNTFKTPTCILFDEHETFQKFGYDAMMTYT 72

  Fly    57 AMNPKNSVFDAKRLIGRRFD----DSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEIS 117
            ....|:..  .|..:...|.    |.:|..|:    .....:.|:.|....|..     |...:.
Zfish    73 RSTVKSQA--RKSFLFEHFKMELYDKEIHRDL----MITAKNGGQMKALTVFSE-----SLRYLK 126

  Fly   118 SMVLTKMKE--TAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINV------LRIINEPT 174
            ...|.|:||  |.:.::.:.| ..|:||||.:|.:.:|..::|...||:.:      |....||.
Zfish   127 DHALEKVKENPTGKTFIASDV-TWVLTVPAIWNAAAKQFMREAAIEAGLVIESEPERLVFALEPE 190

  Fly   175 AAALAYGLDKNLKGERNV-----------------LIFDLGGGTFDVSI-LTIDEGSLFEVRSTA 221
            ||::   ..|:|..|..:                 ::.|.||||.|::: ..:::|.|.|:.:.:
Zfish   191 AASI---YCKHLPSEGYISEEACRDTLEQKPGTQYMVVDCGGGTIDITVHEVVEDGKLKELNAAS 252

  Fly   222 GDTHLGGEDFDNRLVNHFAEEFKRK-YKKDLRSNPRALRRLRTAAERAKR-----------TLSS 274
            |: .:||:..|.:.::...|.|..| |.|..:..|....:|:.....||.           ||..
Zfish   253 GN-DMGGQTVDRKFISFLKEIFSEKIYNKFEQDFPAEALKLKYDIALAKSCDQLVLIQCPVTLQE 316

  Fly   275 STEASLEIDALYEGHDFYSKVSRARFEE------------LCGDLFRNTLEPVEKALKDAKMDKS 327
            ..:....|::.:||      |..|.::|            ...:..:.|.|.:||...:.:::  
Zfish   317 LAKKEKAIESYFEG------VEGAEWDEGSIIIKEDKLQSFFDESLKTTAEKLEKITSNPELN-- 373

  Fly   328 QIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPD---------------------EAVAYGA 371
             |..::||||......::..|:..|....:...:.|.                     .|:.||.
Zfish   374 -IEYMLLVGGFAECKILKKFLKERFDKCKIVCPVEPQVVIIKGAIRYAKQPKVVKSRMSALTYGI 437

  Fly   372 AIQA---AILSGDKSSEIKDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQSKT--FTTYAD 431
            .|.|   .:|..|||:.:.          |.|...........:.:...:.|.:.:.  |.....
Zfish   438 RIDAPFDKVLHKDKSNYVN----------SEGQTYCDVCFETFVRKGESVNCDEVRQFFFNPSHT 492

  Fly   432 NQPAVTIQVFEGERALTKDNNV----------LGTFDLTGVPPAPRGVP---KIDVTFDLDANGI 483
            ||.:...|.|.     |.:..|          :|.|:: |:|....|:.   |:::.|     |.
Zfish   493 NQTSAIFQFFS-----TNEKQVQFIDEPGVEPVGFFEV-GMPKTDGGLSREIKLEIKF-----GS 546

  Fly   484 LNVTAKEQGTGNAKNITIKND 504
            ..:.|......:.:..::|:|
Zfish   547 TEMKATATDVDSGETTSVKHD 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 126/606 (21%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 101/464 (22%)
hspa12a.2XP_003198604.1 HSPA12_like_NBD 6..420 CDD:212671 96/436 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.