DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and hspa12a.3

DIOPT Version :10

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001038346.3 Gene:hspa12a.3 / 559031 ZFINID:ZDB-GENE-030131-8896 Length:571 Species:Danio rerio


Alignment Length:613 Identity:122/613 - (19%)
Similarity:217/613 - (35%) Gaps:169/613 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGV-------------------FQYGKVEIIANDQGNRTTPSYVAFTDSE--RL 47
            |.||.||:||...:                   |.|...:          ||:.:.|.:.|  :.
Zfish     8 IAIDFGTSYSGYAISFKTKQPQESIQIPNWGVNFGYNTFK----------TPTCILFDEHETFQK 62

  Fly    48 IG-DAAKNQVAMNPKNSVFDAKRLIGRRFD----DSKIQEDIKHWPFKVINDNGKPKISVEFKGA 107
            .| ||........||:..  .|..:...|.    |.:|..|:    .....:.|:.|....|.. 
Zfish    63 FGYDAMMTYTRSTPKSQA--RKSFLFEHFKMELYDKEIHRDL----MITAKNGGQMKALTVFSE- 120

  Fly   108 NKCFSPEEISSMVLTKMKE--TAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINV---- 166
                |...:....|.|:||  |.:.::.:.| ..|:||||.:|.:.:|..::|...||:.:    
Zfish   121 ----SLRYLKDHALEKIKENTTGKTFIASDV-TWVLTVPAIWNAAAKQFMREAAIEAGLVIESEP 180

  Fly   167 --LRIINEPTAAALAYGLDKNLKGERNV-----------------LIFDLGGGTFDVSI-LTIDE 211
              |....||.||::   ..|.|..|..:                 ::.|.||||.|::: ..:::
Zfish   181 ERLVFALEPEAASI---YCKQLPSEGYISEEACRDTLEQKPGTQYMVVDCGGGTIDITVHEVVED 242

  Fly   212 GSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRK-YKKDLRSNPRALRRLRTAAERAKR----- 270
            |.|.|:.:.:|: .:||:..|.:.::...|.|..| |.|..:..|....:|:.....||.     
Zfish   243 GKLKELNAASGN-DMGGQTVDRKFISFLKEIFSEKIYNKFEQDFPAEALKLKYDIALAKSCDQLV 306

  Fly   271 ------TLSSSTEASLEIDALYEGHDFYSKVSRARFEE------------LCGDLFRNTLEPVEK 317
                  ||....:....|::.:||      |..|.::|            ...:..:.|.|.:||
Zfish   307 LIQCPVTLQDLAKKEKAIESYFEG------VEGAEWDEGSIIIKEDKLQSFFDESLKTTAEKLEK 365

  Fly   318 ALKDAKMDKSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPD------------------ 364
            .:.:.:::   |..::||||......::..|:..|....:...:.|.                  
Zfish   366 IMSNPELN---IEYMLLVGGFAECKILKKFLKERFDKCKIVCPVEPQVVIIKGAIRYAKQPKVVK 427

  Fly   365 ---EAVAYGAAIQA---AILSGDKSSEIKDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQS 423
               .|:.||..|.|   .:|...|:|.:.          |.|...........:.:...:.|.:.
Zfish   428 SRMSALTYGIRIDAPFDKVLHKGKTSYVN----------SEGQTYCDVCFETFVRKGESVNCDEV 482

  Fly   424 KT--FTTYADNQPAVTIQVFEGERALTKDNNV----------LGTFDLTGVPPAPRGVP---KID 473
            :.  |.....||...|.|.|.     |.:..|          :|.|.: |:|....|:.   |::
Zfish   483 RQFFFNPSDTNQTFATFQFFS-----TNEKQVQFIDEPGVESVGVFQV-GMPKTDGGLSREIKLE 541

  Fly   474 VTFDLDANGILNVTAKEQGTGNAKNITI 501
            :.|   .:..:..||.:..:|...::.:
Zfish   542 IKF---GSTEMKATATDVDSGETTSVKL 566

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 122/613 (20%)
hspa12a.3NP_001038346.3 ASKHA_NBD_HSP70_HSPA12 8..420 CDD:466827 93/446 (21%)

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