DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and hspa13

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001017223.1 Gene:hspa13 / 549977 XenbaseID:XB-GENE-963595 Length:476 Species:Xenopus tropicalis


Alignment Length:435 Identity:172/435 - (39%)
Similarity:248/435 - (57%) Gaps:63/435 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MP---AIGIDLGTTYSCVGVFQ--YGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNP 60
            ||   .|||||||||..||||.  .|:|.:|.::.|:::.||.|:||:.:..:|.........||
 Frog    28 MPTPRVIGIDLGTTYCSVGVFHPGTGEVRVITDENGHQSIPSIVSFTEKDVFVGYDGLELADANP 92

  Fly    61 KNSVFDAKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCF--SPEEISSMVLTK 123
            :|:::||||.||:.|...:::::...:.|||:|.||....||   ..|:.|  :||.|||.:|.|
 Frog    93 QNTIYDAKRFIGKIFTQEELEKESVRYQFKVLNRNGDVFFSV---STNETFAVTPEYISSQLLLK 154

  Fly   124 MKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKG 188
            :|:.||.|||..|..|||:|||.|::.||..|..|..:||:::||:||||||||:||||.|  ..
 Frog   155 LKKMAEDYLGLPVSKAVISVPAEFDERQRNYTVKAANLAGLDILRVINEPTAAAMAYGLHK--VD 217

  Fly   189 ERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRS 253
            ..|||:.||||||.|||:|. .:|.:|..|:.||:..|||:||:.||:.:..::...:| ..:.|
 Frog   218 VFNVLVVDLGGGTLDVSLLN-KQGGMFLTRAMAGNNKLGGQDFNQRLLQYLYDKIYTRY-GSVPS 280

  Fly   254 NPRALRRLRTAAE--------------RAKRTLSSSTEASLEIDALY---------EGH------ 289
            ....:.|||.|.|              |...||:|:...|.:.|.:.         |.|      
 Frog   281 QKEEIHRLRQAVEAIKLNLTLHNSSWVRMPLTLASTHPDSSKPDKIIPNESLENTGEIHPKSAHL 345

  Fly   290 -DFYS------------------KVSRARFEELCGDLFRNTLEPVEKALKDAKMDKSQIHDIVLV 335
             |.||                  :::|..||.|..|||:..|.|||:.||:..:.|.::.:||||
 Frog   346 GDSYSSSGPQIQNKHAEKVYFEMEITRHIFETLNEDLFQKILIPVEQVLKEGHVLKEEVDEIVLV 410

  Fly   336 GGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSG 380
            |||||||:::.::::|| ||..|.|::||.||..|.||||.|:.|
 Frog   411 GGSTRIPRIRQVIRDFF-GKDPNTSVDPDLAVVTGVAIQAGIMGG 454

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 171/434 (39%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 169/427 (40%)
hspa13NP_001017223.1 HSPA13-like_NBD 23..468 CDD:212679 172/435 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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