DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and hspa4b

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_956151.1 Gene:hspa4b / 334086 ZFINID:ZDB-GENE-030131-6018 Length:840 Species:Danio rerio


Alignment Length:722 Identity:203/722 - (28%)
Similarity:344/722 - (47%) Gaps:115/722 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVF 65
            |..:|.|:|.....|.|.:.|.:|.:||:..:|.||:.|:|....|.||.|||:|:..|.||:|.
Zfish     1 MSVVGFDVGFLNCYVAVARAGGIETVANEYSDRCTPACVSFGPRNRSIGAAAKSQMVTNCKNTVH 65

  Fly    66 DAKRLIGRRFDDSKIQE-------DIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTK 123
            ..||..||.|.|..:|.       |:...|      :|...:.|.:....|.||.|::::|:|||
Zfish    66 GFKRFHGRAFSDPFVQNLKPSLVYDLAQMP------SGTTGLKVMYMEEEKVFSIEQVTAMLLTK 124

  Fly   124 MKETAEAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKN--- 185
            :|||||:.|...|.|.||:||.::.|::|::..||..|||:|.||::||.||.|||||:.|.   
Zfish   125 LKETAESALKKPVADCVISVPCFYTDAERRSVIDAAQIAGLNCLRLMNETTAVALAYGIYKQDLP 189

  Fly   186 --LKGERNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYK 248
              .:..|||:..|:|...:.||:...::|.| ::.:||.|..:||:.||.|||.:|.|||..|||
Zfish   190 APEEKPRNVVFVDIGHSGYQVSVCAFNKGKL-KILATAFDPEMGGKYFDERLVKYFCEEFVVKYK 253

  Fly   249 KDLRSNPRALRRLRTAAERAKRTLS-SSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTL 312
            .|.::.||||.||....|:.|:.:| :|::..|.|:......|..|:::||:|||:|.|:.....
Zfish   254 LDAKTKPRALIRLFQECEKLKKLMSANSSDLPLNIECFMNDVDVSSRLNRAQFEEMCADILARVE 318

  Fly   313 EPVEKALKDAKMDKSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAI 377
            .|:...|:.|.:.|..||.:.:|||::|:|.::..:..|| ||..:.::|.|||||.|.|:|.||
Zfish   319 PPLRSLLEQAHLKKDDIHAVEIVGGASRMPAIKERISKFF-GKEPSTTLNADEAVARGCALQCAI 382

  Fly   378 LSGDKSSEIKDVLLVDVAPLSLGIE----TAGGVM-TKLIERNSRIPCKQSKTFTTYADNQPAVT 437
            ||  .:.::::..:.:|.|..:.::    ...||. .::..:|...|.  ||..|.|. .:|...
Zfish   383 LS--PAFKVREFSITEVVPFPISLKWNSAAEDGVSDCEVFPKNHAAPF--SKVLTFYR-REPFTL 442

  Fly   438 IQVFEGERALTKDNNVLGTFDLTGVPPAPRG-VPKIDVTFDLDANGILNV--------------- 486
            ...:...:.|...:..:|.:.:..|.|...| ..|:.|...::.:||.:|               
Zfish   443 DAYYNSPKELPYPDPTIGQYVVQKVVPQASGESSKVKVKVRVNIHGIFSVSSASLVEVQKSEEEE 507

  Fly   487 --------------------------------------------TAKEQGTGNAK---------- 497
                                                        |:.|:|....|          
Zfish   508 ESMETEQSTEKENENKMQVDQEEQKTPETEQENGEKKPGTEEMETSAEEGKQEKKSDQPPQAKKP 572

  Fly   498 -------NITIKNDKGRLSQADIDRMLSEAE-KYAEEDERHRQRIAARNQLETYLFGVKEAAENG 554
                   ::.|:|:.......|:..:..|:| |...:|:..::|..|:|.:|.|::.:::.....
Zfish   573 KVKTKVLDLPIENNPQWQLANDMLNLFVESEGKMIMQDKLEKERNDAKNYVEEYVYEMRDKLHGI 637

  Fly   555 GDR-ISAADKSSIVERCSEAMKWL-DSNTTAEKEEYEYKLKELEQFCSPIMTKMHKGGGDGQQAP 617
            .:: ::.:|:..:..:..:...|| :......|:.|..||.||:....||..:..    :.::.|
Zfish   638 FEKFVTESDRDVLSLKLEDTEVWLYEDGEDQPKQIYIDKLAELKNLGQPIQDRYR----EFEERP 698

  Fly   618 NFGQQAG 624
            ...::.|
Zfish   699 KAFEELG 705

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 202/721 (28%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 150/388 (39%)
hspa4bNP_956151.1 HSPA4_NBD 2..384 CDD:212687 150/389 (39%)
HSP70 3..693 CDD:278441 200/706 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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