DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and Hspa12b

DIOPT Version :10

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001381945.1 Gene:Hspa12b / 311427 RGDID:1312004 Length:685 Species:Rattus norvegicus


Alignment Length:639 Identity:142/639 - (22%)
Similarity:232/639 - (36%) Gaps:209/639 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 IIANDQGNRTTPSYVAF---TDSERLI-------GD-AAKNQ-----VAMNPKNSVFDAKRLIGR 73
            ::|.|.|  ||.|..||   ||.|.:.       || ...:|     :.:.|: .:|.:.....|
  Rat    62 VVAIDFG--TTSSGYAFSFATDPEAIHMMRKWEGGDPGVAHQKTPTCLLLTPE-GIFHSFGYTAR 123

  Fly    74 RFDDSKIQEDIKHW----PFKV----IND----------NGKPKISVE-FKGANKCFSPEEISSM 119
            .:......|:.:.|    .||:    ..|          |||..:::| |..|.:.|...     
  Rat   124 DYYHDLDPEEARDWLYFEKFKMKIHSATDLTLKTQLEAVNGKKMLALEVFAHALRFFKEH----- 183

  Fly   120 VLTKMKETAEAYLGTTVKDA---VITVPAYFNDSQRQATKDAGAIAGI------NVLRIINEPTA 175
            .|.:::|.:|..|   .|||   |:||||.:....:|..::|..:||:      ..|.|..||.|
  Rat   184 ALQELREQSECML---EKDAVRWVLTVPAIWKQPAKQFMREAAYLAGLVSREDAEKLLIALEPEA 245

  Fly   176 AAL-----------------AYG--------LDKNLKGERNVL---------------------- 193
            |::                 |.|        :|.:.:..|..|                      
  Rat   246 ASVYCRKLRLHQLMDLSSRTAGGGRLGERRSIDSSFRHAREQLRRSRHSRTFLVESGVGELWSEM 310

  Fly   194 -------IFDLGGGTFDVSILTIDE--GSLFEV-RSTAGDTHLGGED--FDNRLVNHFAEEFKRK 246
                   :.|.||||.|:::..:::  |:|.|: :::.|.....|.|  |:..|...|.|:|..|
  Rat   311 QEGDRYMVADCGGGTVDLTVHQLEQPHGTLKELYKASGGPYGAVGVDLAFEQLLCRIFGEDFIAK 375

  Fly   247 YKKDLRSNPRALRRLRTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFE---------- 301
            :|   |..|.|...|..|.|..|||.......:|.|...:...|||.|......|          
  Rat   376 FK---RQRPAAWVDLTIAFEARKRTAGPHRAGALNISLPFSFIDFYRKQRGHNVETALRRSSVNF 437

  Fly   302 -------------ELCGDLFRNT----LEPVEKALKDAKMDKSQIHDIVLVGGSTRIPKVQNLLQ 349
                         |...:||:.|    ::.:|..|  ||.:...:..:.||||......:|:.:|
  Rat   438 VKWSSQGMLRMSCEAMNELFQPTVSGIIQHIEMLL--AKPEVQGVKLLFLVGGFAESAVLQHAVQ 500

  Fly   350 NFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLVDVAPLSLGIETAGGVMT----- 409
            ...|.:.|.:.:..|..:   ..::.|:|.|    :...|:.|..:||:.|:    ||:.     
  Rat   501 EALGNRGLRVVVPHDVGL---TILKGAVLFG----QAPGVVRVRRSPLTYGV----GVLNRFVPG 554

  Fly   410 -----KLIERNSR----------IPCKQS--------KTFTTYADNQPAVTIQVF---------- 441
                 ||:.|:.|          :..:||        :::......|..|.|.::          
  Rat   555 HHPPEKLLVRDGRRWCTDVFERFVAAEQSVALGEEVRRSYCPARPGQRRVLINLYCCAAEDARFI 619

  Fly   442 --EGER---ALTKDNNVLGTFDLTGVPPAPR--------GVPKIDVT-FDLDAN 481
              .|.|   ||:.:....|:.:.||..|:.|        |..:|.|| .|:..|
  Rat   620 TDPGVRKCGALSLELEPEGSPENTGTSPSRREIRAAMQFGDTEIKVTAVDVSTN 673

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 142/639 (22%)
Hspa12bNP_001381945.1 ASKHA_ATPase-like 61..528 CDD:483947 110/484 (23%)

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