DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and Hspa13

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_062144.2 Gene:Hspa13 / 29734 RGDID:3775 Length:471 Species:Rattus norvegicus


Alignment Length:424 Identity:170/424 - (40%)
Similarity:245/424 - (57%) Gaps:55/424 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGVF--QYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFD 66
            |||||||||..||||  ..|||::|.::.|:.:.||.|:|||.:..:|..:......||:|:::|
  Rat    34 IGIDLGTTYCSVGVFFPGTGKVKVIPDENGHISIPSMVSFTDGDVYVGYESLELADSNPQNTIYD 98

  Fly    67 AKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCF--SPEEISSMVLTKMKETAE 129
            |||.||:.|...:::.:|..:||||::.||..:.||.   :|:..  |||.:.|.:|.|:||.||
  Rat    99 AKRFIGKIFTPEELEAEIGRYPFKVLHKNGMAEFSVT---SNETIIVSPEYVGSRLLLKLKEMAE 160

  Fly   130 AYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLI 194
            .|||..|.:|||:|||.|:..||.:|..|..:||:.:||:||||||||:||||.|  .....||:
  Rat   161 KYLGMPVANAVISVPAEFDLQQRNSTIQAANLAGLKILRVINEPTAAAMAYGLHK--VDVFYVLV 223

  Fly   195 FDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALR 259
            .||||||.|||:|. .:|.:|..|:.:|:..|||:||:.||:.:..:|..:.| ..|.|....:.
  Rat   224 IDLGGGTLDVSLLN-KQGGMFLTRAMSGNNKLGGQDFNQRLLQYLYKEIYQTY-GFLPSRKEEIH 286

  Fly   260 RLRTAAERAKRTLS---------------------SSTEASLEIDALY--EGHD----------- 290
            |||.|.|..|..|:                     .:.::.|..|.|.  :||.           
  Rat   287 RLRQAVEMVKLNLTLHQSAQVSVLLTVEENDSQKPQNADSKLPEDQLTPGDGHHVNRVFRPGLSD 351

  Fly   291 ---------FYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMDKSQIHDIVLVGGSTRIPKVQN 346
                     |.::|||..|..|..|||:..|.|:::.||:..:||::|.::||||||||||:::.
  Rat   352 STSGKSQVLFETEVSRKLFNTLNEDLFQKILVPIQQVLKEGLLDKTEIDEVVLVGGSTRIPRIRQ 416

  Fly   347 LLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSG 380
            ::|.|| ||..|.|::||.||..|.||||.|..|
  Rat   417 VIQEFF-GKDPNTSVDPDLAVVTGVAIQAGIDGG 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 170/424 (40%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 169/421 (40%)
Hspa13NP_062144.2 HSPA13-like_NBD 12..463 CDD:212679 170/424 (40%)
PRK13930 32..442 CDD:237564 164/415 (40%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 316..339 3/22 (14%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

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