DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and Hspa4

DIOPT Version :10

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_705893.1 Gene:Hspa4 / 266759 RGDID:628878 Length:840 Species:Rattus norvegicus


Alignment Length:815 Identity:221/815 - (27%)
Similarity:358/815 - (43%) Gaps:194/815 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MPAIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVF 65
            |..:|||||.....|.|.:.|.:|.|||:..:|.||:.|:|....|.:|.|||:||..|.||:|.
  Rat     1 MSVVGIDLGFQSCYVAVARAGGIETIANEYSDRCTPACVSFGPKNRSVGAAAKSQVISNAKNTVQ 65

  Fly    66 DAKRLIGRRFDDSKIQEDIKHWPFKVIN-DNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAE 129
            ..||..||.|.|..::.:..:..:.::. ..|...|.|.:....:.|:.|::::|:|:|:|||||
  Rat    66 GFKRFHGRAFSDPFVEAEKSNLAYDIVQLPTGLTGIKVTYMEEERNFTTEQVTAMLLSKLKETAE 130

  Fly   130 AYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKN-----LKGE 189
            :.|...|.|.|::||:::.|::|::..||..|||:|.||::||.||.|||||:.|.     .:..
  Rat   131 SVLKKPVVDCVVSVPSFYTDAERRSVMDATQIAGLNCLRLMNETTAVALAYGIYKQDLPALEEKP 195

  Fly   190 RNVLIFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSN 254
            |||:..|:|...:.||:...:.|.| :|.:||.||.|||..||..|||||.|||.:|||.|::|.
  Rat   196 RNVVFVDMGHSAYQVSVCAFNRGKL-KVLATAFDTTLGGRKFDEVLVNHFCEEFGKKYKLDIKSK 259

  Fly   255 PRALRRLRTAAERAKRTLS-SSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKA 318
            .|||.||....|:.|:.:| ::::..|.|:......|....::|.:|.|:|.||......|:...
  Rat   260 VRALLRLSQECEKLKKLMSANASDLPLSIECFMNDIDVSGTMNRGKFLEMCDDLLARVEPPLRSI 324

  Fly   319 LKDAKMDKSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKS 383
            |..:|:.|..|:.:.:|||:||||.|:..:..|| ||.|:.::|.||||..|.|:|.||||  .:
  Rat   325 LDQSKLKKEDIYAVEIVGGATRIPAVKEKISKFF-GKELSTTLNADEAVTRGCALQCAILS--PA 386

  Fly   384 SEIKDVLLVDVAPLSLGIE-----TAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEG 443
            .::::..:.||.|..:.:.     ..|....::..:|...|.  ||..|.|. .:|......:..
  Rat   387 FKVREFSITDVVPYPISLRWNSPAEEGSSDCEVFPKNHAAPF--SKVLTFYR-KEPFTLEAYYSS 448

  Fly   444 ERALTKDNNVLGTFDLTGVPPAPRG-VPKIDVTFDLDANGILNVT-------------------- 487
            .:.|...:..:..|.:..|.|...| ..|:.|...::.:||.:|:                    
  Rat   449 PQDLPYPDPAIAQFSVQKVTPQSDGSSSKVKVKVRVNVHGIFSVSSAALVEVHKSEESEEPMETD 513

  Fly   488 --AKEQ-----------------------------------GTGN--------AKNITIK----- 502
              |||:                                   |:.:        ||...:|     
  Rat   514 QNAKEEEKMQVDQEEPHTEEQQPQTPAENKAESEEMETSQAGSKDKKMDQPPQAKKAKVKTSTVD 578

  Fly   503 --------------------NDKGRLSQAD--------------------IDRMLSEAEKYAEED 527
                                .::|::...|                    .|::..|.||:..||
  Rat   579 LPIESQLLWQLDREMLGLYTENEGKMIMQDKLEKERNDAKNAVEEYVYEMRDKLSGEYEKFVSED 643

  Fly   528 ERHR-----------------------------------QRIAAR---------------NQLET 542
            :|:.                                   |.|..|               .|::.
  Rat   644 DRNNFTLKLEDTENWLYEDGEDQPKQVYVDKLAELRTLGQPIKTRFQESEERPKLFEELGKQIQQ 708

  Fly   543 YLFGVK--EAAENGGDRISAADKSSIVERCSEAMKWLDS--------NTTAE----KEEYEYKLK 593
            |:..:.  :..|:..:.:.|||.:.:.:..:|||:|::|        :.||:    .:|.|.|:|
  Rat   709 YMKVISSFKNKEDQYEHLDAADMTKVEKSTNEAMEWMNSKLNLQNKQSLTADPVVKTKEIEAKIK 773

  Fly   594 ELEQFCSPIMTKMHKGGGDGQQAPNFGQQAGGYKG 628
            ||...||||::|........::.|...:|.|...|
  Rat   774 ELTNICSPIISKPKPKVEPPKEEPKHAEQNGPVDG 808

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 220/814 (27%)
Hspa4NP_705893.1 ASKHA_NBD_HSP70_HSPA4 2..382 CDD:466843 148/381 (39%)
PTZ00121 <499..743 CDD:173412 27/243 (11%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 500..575 7/74 (9%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 781..840 7/28 (25%)

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