DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and ssa1

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_593704.1 Gene:ssa1 / 2542875 PomBaseID:SPAC13G7.02c Length:644 Species:Schizosaccharomyces pombe


Alignment Length:642 Identity:442/642 - (68%)
Similarity:530/642 - (82%) Gaps:10/642 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDA 67
            :|||||||||||||.|...:|||||||||||||||||||||:||||||||||||||||.|::|||
pombe     4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDA 68

  Fly    68 KRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYL 132
            ||||||||:|.::|.|:||||||||..:|||.|.|||||..|.|:|||||||||.||:|:|||:|
pombe    69 KRLIGRRFNDPEVQSDMKHWPFKVIEKDGKPLIQVEFKGETKTFTPEEISSMVLLKMRESAEAFL 133

  Fly   133 GTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFDL 197
            |..|.|||:||||||||||||||||||.|||:|||||||||||||:|||||::.:.|.|||||||
pombe   134 GGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQHETNVLIFDL 198

  Fly   198 GGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRLR 262
            ||||||||:|||:|| :|||::|||||||||||||:|||||||:|||||.|||:..|.||:||||
pombe   199 GGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDSRLVNHFAQEFKRKNKKDITGNARAVRRLR 262

  Fly   263 TAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMDKS 327
            ||.||||||||||.:||:|||:||||.|||:.::||||||||.||||||:|||||.|:|:|:|||
pombe   263 TACERAKRTLSSSAQASIEIDSLYEGIDFYTSITRARFEELCADLFRNTMEPVEKVLRDSKIDKS 327

  Fly   328 QIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLV 392
            .:::|||||||||||::|.|:.:||.||....|||||||||||||:|||||.||.|.:.:|:||:
pombe   328 SVNEIVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLLL 392

  Fly   393 DVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVLGTF 457
            |||||||||||||||||.||:||:.||.|:|:.|:|||||||.|.|||||||||.|||.|:||.|
pombe   393 DVAPLSLGIETAGGVMTPLIKRNTTIPTKKSEVFSTYADNQPGVLIQVFEGERARTKDCNLLGKF 457

  Fly   458 DLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRMLSEAEK 522
            :|:|:||||||||:|:||||:||||||||:|.|:|||..:.|||.|||||||:.:||||:|||||
pombe   458 ELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVSEAEK 522

  Fly   523 YAEEDERHRQRIAARNQLETYLFGVKEAAE--NGGDRISAADKSSIVERCSEAMKWLDSNTTAEK 585
            |..|||....||.|:|.||:|.:.::.:.:  |..|::.|:||.:|.:...|.::|||.||||.|
pombe   523 YKAEDEAETSRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKEAIDKAVKETIEWLDHNTTAAK 587

  Fly   586 EEYEYKLKELEQFCSPIMTKMHKGGGDGQQAPN-------FGQQAGGYKGPTVEEVD 635
            :|||.|.||||...:|||.|:::.||....||.       .|...|...||.|||||
pombe   588 DEYEDKQKELEGVANPIMAKIYQAGGAPGGAPGGMPGGAPGGAPGGADNGPEVEEVD 644

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 440/640 (69%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 287/375 (77%)
ssa1NP_593704.1 PTZ00009 4..644 CDD:240227 440/640 (69%)
HSPA1-2_6-8-like_NBD 4..378 CDD:212675 286/374 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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