DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and ssa2

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_588421.1 Gene:ssa2 / 2539225 PomBaseID:SPCC1739.13 Length:647 Species:Schizosaccharomyces pombe


Alignment Length:645 Identity:434/645 - (67%)
Similarity:532/645 - (82%) Gaps:13/645 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDA 67
            :|||||||||||||.|...:|||||||||||||||||||||:||||||||||||||||.|::|||
pombe     4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDA 68

  Fly    68 KRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYL 132
            ||||||:|||.::|.|:||||||||:.:|||.:.||:||..|.|:|||||||||.||:|||||||
pombe    69 KRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYL 133

  Fly   133 GTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFDL 197
            |..|.|||:||||||||||||||||||.|||:|||||||||||||:|||||::.:||.|||||||
pombe   134 GGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDL 198

  Fly   198 GGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRLR 262
            ||||||||:|||:|| :|||::|||||||||||||:||||||.:|||||.|||:..|.||:||||
pombe   199 GGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLR 262

  Fly   263 TAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMDKS 327
            ||.||||||||||.:||:|||:|:||.|||:.::||||||||.||||.|:||||:.|:|:|:||:
pombe   263 TACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKA 327

  Fly   328 QIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLV 392
            .:::|||||||||||:||.|:.:||.||....|||||||||||||:|||:|:||.|.:.:|:||:
pombe   328 SVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLL 392

  Fly   393 DVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVLGTF 457
            ||||||:||||||||||.||:||:.||.|:|:.|:||:||||.|.|||||||||.|||.|:||.|
pombe   393 DVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKF 457

  Fly   458 DLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRMLSEAEK 522
            :|:|:||||||||:|:||||:||||||||:|.|:|||..:.|||.|||||||:.:||||::||||
pombe   458 ELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEK 522

  Fly   523 YAEEDERHRQRIAARNQLETYLFGVKEAAE--NGGDRISAADKSSIVERCSEAMKWLDSNTTAEK 585
            |..|||....||.|:|.||:|.:.::.:.:  |..|::.|:||.::.:...|.::||||||||.|
pombe   523 YKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAK 587

  Fly   586 EEYEYKLKELEQFCSPIMTKMHKGGGDGQQAPNF----------GQQAGGYKGPTVEEVD 635
            :|:|.|.||||...:|||.|:::.||.....|..          |...||..||.|||||
pombe   588 DEFEAKQKELESVANPIMAKIYQAGGAPGGMPGAAPGAAPGAAPGAAPGGDNGPEVEEVD 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 432/643 (67%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 283/375 (75%)
ssa2NP_588421.1 PTZ00009 4..647 CDD:240227 432/643 (67%)
HSPA1-2_6-8-like_NBD 4..379 CDD:212675 283/375 (75%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.720

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