DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp68 and ssa2

DIOPT Version :10

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_588421.1 Gene:ssa2 / 2539225 PomBaseID:SPCC1739.13 Length:647 Species:Schizosaccharomyces pombe


Alignment Length:645 Identity:434/645 - (67%)
Similarity:532/645 - (82%) Gaps:13/645 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDA 67
            :|||||||||||||.|...:|||||||||||||||||||||:||||||||||||||||.|::|||
pombe     4 SIGIDLGTTYSCVGHFSNNRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPHNTIFDA 68

  Fly    68 KRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYL 132
            ||||||:|||.::|.|:||||||||:.:|||.:.||:||..|.|:|||||||||.||:|||||||
pombe    69 KRLIGRKFDDPEVQSDMKHWPFKVISKDGKPVLQVEYKGETKTFTPEEISSMVLMKMRETAEAYL 133

  Fly   133 GTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFDL 197
            |..|.|||:||||||||||||||||||.|||:|||||||||||||:|||||::.:||.|||||||
pombe   134 GGKVTDAVVTVPAYFNDSQRQATKDAGLIAGLNVLRIINEPTAAAIAYGLDRSNQGESNVLIFDL 198

  Fly   198 GGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRLR 262
            ||||||||:|||:|| :|||::|||||||||||||:||||||.:|||||.|||:..|.||:||||
pombe   199 GGGTFDVSLLTIEEG-IFEVKATAGDTHLGGEDFDSRLVNHFIQEFKRKNKKDITGNARAVRRLR 262

  Fly   263 TAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMDKS 327
            ||.||||||||||.:||:|||:|:||.|||:.::||||||||.||||.|:||||:.|:|:|:||:
pombe   263 TACERAKRTLSSSAQASIEIDSLFEGIDFYTSITRARFEELCADLFRKTMEPVERVLRDSKVDKA 327

  Fly   328 QIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLV 392
            .:::|||||||||||:||.|:.:||.||....|||||||||||||:|||:|:||.|.:.:|:||:
pombe   328 SVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLL 392

  Fly   393 DVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVLGTF 457
            ||||||:||||||||||.||:||:.||.|:|:.|:||:||||.|.|||||||||.|||.|:||.|
pombe   393 DVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKF 457

  Fly   458 DLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRMLSEAEK 522
            :|:|:||||||||:|:||||:||||||||:|.|:|||..:.|||.|||||||:.:||||::||||
pombe   458 ELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEK 522

  Fly   523 YAEEDERHRQRIAARNQLETYLFGVKEAAE--NGGDRISAADKSSIVERCSEAMKWLDSNTTAEK 585
            |..|||....||.|:|.||:|.:.::.:.:  |..|::.|:||.::.:...|.::||||||||.|
pombe   523 YKAEDEAESGRIQAKNHLESYAYSLRNSLDDPNLKDKVDASDKETVDKAVKETIEWLDSNTTAAK 587

  Fly   586 EEYEYKLKELEQFCSPIMTKMHKGGGDGQQAPNF----------GQQAGGYKGPTVEEVD 635
            :|:|.|.||||...:|||.|:::.||.....|..          |...||..||.|||||
pombe   588 DEFEAKQKELESVANPIMAKIYQAGGAPGGMPGAAPGAAPGAAPGAAPGGDNGPEVEEVD 647

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 432/643 (67%)
ssa2NP_588421.1 PTZ00009 4..647 CDD:240227 432/643 (67%)

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