DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and hsp-3

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001370435.1 Gene:hsp-3 / 180880 WormBaseID:WBGene00002007 Length:661 Species:Caenorhabditis elegans


Alignment Length:623 Identity:372/623 - (59%)
Similarity:490/623 - (78%) Gaps:10/623 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFT--DSERLIGDAAKNQVAMNPKNSVFD 66
            ||||||||||||||::.|:|||||||||||.|||||||:  ..:||||||||||:.:||:|::||
 Worm    36 IGIDLGTTYSCVGVYKNGRVEIIANDQGNRITPSYVAFSGDQGDRLIGDAAKNQLTINPENTIFD 100

  Fly    67 AKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAY 131
            |||||||.::|..:|.||||||||||:.:.||.:.|:....||.|:|||:|:|||.||||.||:|
 Worm   101 AKRLIGRDYNDKTVQADIKHWPFKVIDKSNKPSVEVKVGSDNKQFTPEEVSAMVLVKMKEIAESY 165

  Fly   132 LGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFD 196
            ||..||:||:||||||||:|||||||||.|||:||:||||||||||:||||||. .||||:|:||
 Worm   166 LGKEVKNAVVTVPAYFNDAQRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFD 229

  Fly   197 LGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRL 261
            |||||||||:||||.| :|||.:|.|||||||||||.|::.:|.:.:|:|..||||.:.||:::|
 Worm   230 LGGGTFDVSMLTIDNG-VFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDKRAVQKL 293

  Fly   262 RTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMDK 326
            |...|:|||.||:..:..:||::|::|.||...::||:||||..||||.||:||:|.|:|:.:.|
 Worm   294 RREVEKAKRALSTQHQTKVEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDSDLKK 358

  Fly   327 SQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLL 391
            ..:|:||||||||||||||.|::.||.||..:..||||||||||||:|..::||::  :..:::|
 Worm   359 DDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVISGEE--DTGEIVL 421

  Fly   392 VDVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVLGT 456
            :||.||::||||.||||||||.||:.||.|:|:.|:|.|||||.||||||||||.:||||:.||.
 Worm   422 LDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADNQPTVTIQVFEGERPMTKDNHQLGK 486

  Fly   457 FDLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRMLSEAE 521
            |||||:||||||||:|:|||::|.||||:|||:::||||...|||.||:.|||..||:||:::||
 Worm   487 FDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKGTGNKNKITITNDQNRLSPEDIERMINDAE 551

  Fly   522 KYAEEDERHRQRIAARNQLETYLFGVK---EAAENGGDRISAADKSSIVERCSEAMKWLDSNTTA 583
            |:||:|::.:.:..|||:||:|.:.:|   |..|..|.::...||.:|.|...||:.||.||..|
 Worm   552 KFAEDDKKVKDKAEARNELESYAYNLKNQIEDKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEA 616

  Fly   584 EKEEYEYKLKELEQFCSPIMTKMHK-GGGDGQQAPNFG 620
            ..||.:.:.|:||....||::|::| .|..|::||..|
 Worm   617 SAEELKEQKKDLESKVQPIVSKLYKDAGAGGEEAPEEG 654

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 372/623 (60%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 242/376 (64%)
hsp-3NP_001370435.1 PTZ00009 32..648 CDD:240227 368/615 (60%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.730

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