DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp68 and hsp-6

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001370558.1 Gene:hsp-6 / 178873 WormBaseID:WBGene00002010 Length:657 Species:Caenorhabditis elegans


Alignment Length:626 Identity:309/626 - (49%)
Similarity:426/626 - (68%) Gaps:26/626 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPKNSVFDA 67
            ||||||||.|||.:.:....::|.|.:|.|||||.|||| |.|||:|..||.|...|..|::|..
 Worm    34 IGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFAT 98

  Fly    68 KRLIGRRFDDSKIQEDIKHWPFKVIN-DNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAY 131
            |||||||::|.::|:|:|..|:|::. .||...:..:    .|.:||.::.:.||.|||||||:|
 Worm    99 KRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEAQ----GKVYSPSQVGAFVLMKMKETAESY 159

  Fly   132 LGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFD 196
            |||||.:||:||||||||||||||||||.|:|:||||:|||||||||||||||: .|::.:.::|
 Worm   160 LGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKD-AGDKIIAVYD 223

  Fly   197 LGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRL 261
            |||||||||||.|.:| :|||:||.|||.|||||||:.||:|...|||::...||..:|:|::||
 Worm   224 LGGGTFDVSILEIQKG-VFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRL 287

  Fly   262 RTAAERAKRTLSSSTEASLEI-----DALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKD 321
            |.|||:||..|||:|:..:.:     |.....| ...|::||:||::.|||.:.|:||..|||.|
 Worm   288 REAAEKAKCELSSTTQTDINLPYITMDQSGPKH-LNLKLTRAKFEQIVGDLIKRTIEPCRKALHD 351

  Fly   322 AKMDKSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEI 386
            |::..|||.|::||||.:|:||||..:|..| ||..:.::|||||||.|||||.|:|:||    :
 Worm   352 AEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD----V 411

  Fly   387 KDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDN 451
            .||||:||.||||||||.||:|||||.||:.||.|:|:.|:|.||.|..|.|:||:|||.:...|
 Worm   412 TDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSN 476

  Fly   452 NVLGTFDLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRM 516
            .:||.|.|.|:||||||||:::||||:|||||:||:|:::|||..:.|.|:: .|.||:..|:.|
 Worm   477 KLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQS-SGGLSKDQIENM 540

  Fly   517 LSEAEKYAEEDERHRQRIAARNQLETYLFGVKEAAENGGDRISAADKSSIVERCSEAMKWLDSNT 581
            :.||||.|.||.:.::.:...||.|..:...:.......|::...:..::..:.::..|.||:..
 Worm   541 IKEAEKNAAEDAKRKELVEVINQAEGIIHDTEAKMTEFADQLPKDECEALRTKIADTKKILDNKD 605

  Fly   582 TAEKEEYEYKLKELEQFCSPIMTKMHK------GGGDGQQA 616
            ....|..:.....|:|....:....:|      .|||.|:|
 Worm   606 NETPEAIKEACNTLQQQSLKLFEAAYKNMAAKNSGGDAQEA 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 309/626 (49%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 208/381 (55%)
hsp-6NP_001370558.1 dnaK 30..646 CDD:234715 308/624 (49%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.820

Return to query results.
Submit another query.