DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Hsp68 and hsp-6

DIOPT Version :10

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001370558.1 Gene:hsp-6 / 178873 WormBaseID:WBGene00002010 Length:657 Species:Caenorhabditis elegans


Alignment Length:626 Identity:309/626 - (49%)
Similarity:426/626 - (68%) Gaps:26/626 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFT-DSERLIGDAAKNQVAMNPKNSVFDA 67
            ||||||||.|||.:.:....::|.|.:|.|||||.|||| |.|||:|..||.|...|..|::|..
 Worm    34 IGIDLGTTNSCVSIMEGKTPKVIENAEGVRTTPSTVAFTADGERLVGAPAKRQAVTNSANTLFAT 98

  Fly    68 KRLIGRRFDDSKIQEDIKHWPFKVIN-DNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAY 131
            |||||||::|.::|:|:|..|:|::. .||...:..:    .|.:||.::.:.||.|||||||:|
 Worm    99 KRLIGRRYEDPEVQKDLKVVPYKIVKASNGDAWVEAQ----GKVYSPSQVGAFVLMKMKETAESY 159

  Fly   132 LGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFD 196
            |||||.:||:||||||||||||||||||.|:|:||||:|||||||||||||||: .|::.:.::|
 Worm   160 LGTTVNNAVVTVPAYFNDSQRQATKDAGQISGLNVLRVINEPTAAALAYGLDKD-AGDKIIAVYD 223

  Fly   197 LGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRL 261
            |||||||||||.|.:| :|||:||.|||.|||||||:.||:|...|||::...||..:|:|::||
 Worm   224 LGGGTFDVSILEIQKG-VFEVKSTNGDTFLGGEDFDHALVHHLVGEFKKEQGVDLTKDPQAMQRL 287

  Fly   262 RTAAERAKRTLSSSTEASLEI-----DALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKD 321
            |.|||:||..|||:|:..:.:     |.....| ...|::||:||::.|||.:.|:||..|||.|
 Worm   288 REAAEKAKCELSSTTQTDINLPYITMDQSGPKH-LNLKLTRAKFEQIVGDLIKRTIEPCRKALHD 351

  Fly   322 AKMDKSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEI 386
            |::..|||.|::||||.:|:||||..:|..| ||..:.::|||||||.|||||.|:|:||    :
 Worm   352 AEVKSSQIADVLLVGGMSRMPKVQATVQEIF-GKVPSKAVNPDEAVAMGAAIQGAVLAGD----V 411

  Fly   387 KDVLLVDVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDN 451
            .||||:||.||||||||.||:|||||.||:.||.|:|:.|:|.||.|..|.|:||:|||.:...|
 Worm   412 TDVLLLDVTPLSLGIETLGGIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSN 476

  Fly   452 NVLGTFDLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRM 516
            .:||.|.|.|:||||||||:::||||:|||||:||:|:::|||..:.|.|:: .|.||:..|:.|
 Worm   477 KLLGQFSLVGIPPAPRGVPQVEVTFDIDANGIVNVSARDRGTGKEQQIVIQS-SGGLSKDQIENM 540

  Fly   517 LSEAEKYAEEDERHRQRIAARNQLETYLFGVKEAAENGGDRISAADKSSIVERCSEAMKWLDSNT 581
            :.||||.|.||.:.::.:...||.|..:...:.......|::...:..::..:.::..|.||:..
 Worm   541 IKEAEKNAAEDAKRKELVEVINQAEGIIHDTEAKMTEFADQLPKDECEALRTKIADTKKILDNKD 605

  Fly   582 TAEKEEYEYKLKELEQFCSPIMTKMHK------GGGDGQQA 616
            ....|..:.....|:|....:....:|      .|||.|:|
 Worm   606 NETPEAIKEACNTLQQQSLKLFEAAYKNMAAKNSGGDAQEA 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 309/626 (49%)
hsp-6NP_001370558.1 dnaK 30..646 CDD:234715 308/624 (49%)

Return to query results.
Submit another query.