DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and stc-1

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_495808.2 Gene:stc-1 / 174368 WormBaseID:WBGene00006059 Length:450 Species:Caenorhabditis elegans


Alignment Length:388 Identity:152/388 - (39%)
Similarity:229/388 - (59%) Gaps:23/388 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 GIDLGTTYSCVGVFQ--YGKVEIIANDQGNRTTPSYVAF-TDSERLIGDAAKNQVAMNPKNSVFD 66
            |||||||||.:|::.  .|:..|:.:|.|.::.||.||| .:...|||..|..|...|||.:::|
 Worm    37 GIDLGTTYSSIGIYHAVTGETIILPDDLGKKSVPSVVAFLPNGTVLIGTRATEQQEHNPKRTIYD 101

  Fly    67 AKRLIGRRFD--DSKIQEDIKHWPFKV-INDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETA 128
            |||.|||.|:  :.....|.|.:|||: ::..||....:......|...||||.|:::..:|..|
 Worm   102 AKRFIGRNFEKNNKDFLSDQKRYPFKINLDSEGKAFFEIPLDSGTKNVYPEEIGSLIIGYLKSAA 166

  Fly   129 EAYLGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVL 193
            ..:||.|:...||:.||.||:.||..|..|..||.:.|.|:|:|||||||||||.|. :|..||:
 Worm   167 AKHLGVTLGQVVISCPAEFNEKQRNFTAKAAEIAEMEVRRVISEPTAAALAYGLHKK-QGVENVV 230

  Fly   194 IFDLGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRAL 258
            :.||||||.|||:|.: :|.:|..::.||:..|||:||::|:..|...:...|:.|.: .|...:
 Worm   231 VVDLGGGTLDVSVLWL-QGGVFVTQAMAGNNRLGGQDFNDRVQKHLISKIAEKFGKTI-DNKEDI 293

  Fly   259 RRLRTAAERAKRTLSS--STEASLEIDAL----YEGHDFYSKVSRARFEELCGDLFRNTLEPVEK 317
            :::|...|:.|..|::  ||..||.:..:    ||       ::|..||.|.|||.:....|:..
 Worm   294 QQIRMEVEKGKIRLTNVPSTTISLNLKTVGKWNYE-------LTRDEFETLNGDLLKAIELPITA 351

  Fly   318 ALKDAKMDKSQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSG 380
            ||.||.:|.:.:.:||||||||::|.|:.::..|| .|:.|..::|:.||..||::||.::.|
 Worm   352 ALADANLDTADVDEIVLVGGSTQVPAVRKIVGRFF-KKSANYGVDPELAVVTGASVQAGVIGG 413

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 152/388 (39%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 151/385 (39%)
stc-1NP_495808.2 HSPA13-like_NBD 13..427 CDD:212679 152/388 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.820

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