DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and hsp-4

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001370395.1 Gene:hsp-4 / 174203 WormBaseID:WBGene00002008 Length:657 Species:Caenorhabditis elegans


Alignment Length:618 Identity:358/618 - (57%)
Similarity:486/618 - (78%) Gaps:9/618 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFT--DSERLIGDAAKNQVAMNPKNSVFD 66
            |||||||||||||||:.|:|||||||||||.|||||||:  ..|||||||||||:.:||:|::||
 Worm    33 IGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDQGERLIGDAAKNQLTINPENTIFD 97

  Fly    67 AKRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAY 131
            |||||||.:::..:|:||||||||:::.:.||.:.|:.....|.|:|||:|:|||||||:.||:|
 Worm    98 AKRLIGRFYNEKTVQQDIKHWPFKIVDKSNKPNVEVKVGSETKQFTPEEVSAMVLTKMKQIAESY 162

  Fly   132 LGTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFD 196
            ||..||:||:||||||||:|:|||||||:|||:||:||||||||||:||||||. .||||:|:||
 Worm   163 LGHEVKNAVVTVPAYFNDAQKQATKDAGSIAGLNVVRIINEPTAAAIAYGLDKK-DGERNILVFD 226

  Fly   197 LGGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRL 261
            |||||||||:||||.| :|||.:|.|||||||||||.|::.:|.:.:|:|..||||.:.||:::|
 Worm   227 LGGGTFDVSLLTIDSG-VFEVLATNGDTHLGGEDFDQRVMEYFIKLYKKKSGKDLRKDNRAVQKL 290

  Fly   262 RTAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMDK 326
            |...|:|||.||:..:..:||::|::|.||...::||:||||..||||.||:||:|.|:||.|.|
 Worm   291 RREVEKAKRALSTQHQTKIEIESLFDGEDFSETLTRAKFEELNMDLFRATLKPVQKVLEDADMKK 355

  Fly   327 SQIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLL 391
            :.:|:||||||||||||||.|::::|.||..:..||||||||||||:||.::.|.:::  .||:|
 Worm   356 TDVHEIVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIGGVENT--GDVVL 418

  Fly   392 VDVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVLGT 456
            :||.||:|||||.||||||||.||:.||.|:|:.|:|.||:|.||:|.::||||.:..||:.||.
 Worm   419 LDVNPLTLGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGN 483

  Fly   457 FDLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRMLSEAE 521
            ||:||:||||||||:|:|||::|.||||:|:|:::||||...:||.||..|||..||:||:::|:
 Worm   484 FDVTGIPPAPRGVPQIEVTFEIDVNGILHVSAEDKGTGNKNKLTITNDHNRLSPEDIERMINDAD 548

  Fly   522 KYAEEDERHRQRIAARNQLETYLFGVKEA---AENGGDRISAADKSSIVERCSEAMKWLDSNTTA 583
            |:|.:|:..::::.:||:||.|.:.:|..   .|..|.:::..||.||......|::||.||..|
 Worm   549 KFAADDQAQKEKVESRNELEAYAYQMKTQIADKEKLGGKLTDEDKVSIESAVERAIEWLGSNQDA 613

  Fly   584 EKEEYEYKLKELEQFCSPIMTKMHKGGGDGQQA 616
            ..||.:.:.||||....||::|::..||.|:||
 Worm   614 STEENKEQKKELESVVQPIVSKLYSAGGQGEQA 646

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 358/618 (58%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 241/376 (64%)
hsp-4NP_001370395.1 PTZ00009 33..643 CDD:240227 355/613 (58%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0443
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D288077at2759
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
65.730

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