DRSC/TRiP Functional Genomics Resources

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Protein Alignment Hsp68 and Hspa1b

DIOPT Version :9

Sequence 1:NP_524474.1 Gene:Hsp68 / 42852 FlyBaseID:FBgn0001230 Length:635 Species:Drosophila melanogaster
Sequence 2:NP_001316825.1 Gene:Hspa1b / 108348108 RGDID:2840 Length:641 Species:Rattus norvegicus


Alignment Length:641 Identity:463/641 - (72%)
Similarity:551/641 - (85%) Gaps:13/641 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 AIGIDLGTTYSCVGVFQYGKVEIIANDQGNRTTPSYVAFTDSERLIGDAAKNQVAMNPKNSVFDA 67
            |||||||||||||||||:|||||||||||||||||||||||:|||||||||||||:||:|:||||
  Rat     6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVALNPQNTVFDA 70

  Fly    68 KRLIGRRFDDSKIQEDIKHWPFKVINDNGKPKISVEFKGANKCFSPEEISSMVLTKMKETAEAYL 132
            ||||||:|.|..:|.|:|||||:|:||..|||:.|.:||.|:.|.||||||||||||||.|||||
  Rat    71 KRLIGRKFGDPVVQSDMKHWPFQVVNDGDKPKVQVNYKGENRSFYPEEISSMVLTKMKEIAEAYL 135

  Fly   133 GTTVKDAVITVPAYFNDSQRQATKDAGAIAGINVLRIINEPTAAALAYGLDKNLKGERNVLIFDL 197
            |..|.:|||||||||||||||||||||.|||:|||||||||||||:|||||:..|||||||||||
  Rat   136 GHPVTNAVITVPAYFNDSQRQATKDAGVIAGLNVLRIINEPTAAAIAYGLDRTGKGERNVLIFDL 200

  Fly   198 GGGTFDVSILTIDEGSLFEVRSTAGDTHLGGEDFDNRLVNHFAEEFKRKYKKDLRSNPRALRRLR 262
            |||||||||||||:| :|||::|||||.|||||||||||:||.||||||:|||:..|.||:||||
  Rat   201 GGGTFDVSILTIDDG-IFEVKATAGDTDLGGEDFDNRLVSHFVEEFKRKHKKDISQNKRAVRRLR 264

  Fly   263 TAAERAKRTLSSSTEASLEIDALYEGHDFYSKVSRARFEELCGDLFRNTLEPVEKALKDAKMDKS 327
            ||.|||||||||||:||||||:|:||.|||:.::||||||||.||||.|||||||||:|||:||:
  Rat   265 TACERAKRTLSSSTQASLEIDSLFEGIDFYTSITRARFEELCSDLFRGTLEPVEKALRDAKLDKA 329

  Fly   328 QIHDIVLVGGSTRIPKVQNLLQNFFGGKTLNLSINPDEAVAYGAAIQAAILSGDKSSEIKDVLLV 392
            ||||:|||||||||||||.|||:||.|:.||.|||||||||||||:|||||.||||..::|:||:
  Rat   330 QIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLL 394

  Fly   393 DVAPLSLGIETAGGVMTKLIERNSRIPCKQSKTFTTYADNQPAVTIQVFEGERALTKDNNVLGTF 457
            ||||||||:||||||||.||:|||.||.||::|||||:||||.|.|||:|||||:|:|||:||.|
  Rat   395 DVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRF 459

  Fly   458 DLTGVPPAPRGVPKIDVTFDLDANGILNVTAKEQGTGNAKNITIKNDKGRLSQADIDRMLSEAEK 522
            :|:|:||||||||:|:||||:||||||||||.::.||.|..|||.|||||||:.:|:||:.|||:
  Rat   460 ELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAER 524

  Fly   523 YAEEDERHRQRIAARNQLETYLFGVKEAAENGG--DRISAADKSSIVERCSEAMKWLDSNTTAEK 585
            |..|||..|:|:||:|.||:|.|.:|.|.|:.|  .:||.|||..::::|.|.:.||||||.|||
  Rat   525 YKAEDEVQRERVAAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDSNTLAEK 589

  Fly   586 EEYEYKLKELEQFCSPIMTKMHKG------GGDGQQAPNFGQQAGGYKGPTVEEVD 635
            ||:.:|.:|||:.|:||::.:::|      ||.|.|||    :.|...|||:||||
  Rat   590 EEFVHKREELERVCNPIISGLYQGAGAPGAGGFGAQAP----KGGSGSGPTIEEVD 641

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Hsp68NP_524474.1 PTZ00009 2..635 CDD:240227 461/639 (72%)
HSPA1-2_6-8-like_NBD 3..379 CDD:212675 304/375 (81%)
Hspa1bNP_001316825.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53894
OrthoDB 1 1.010 - - D180577at33208
OrthoFinder 1 1.000 - - FOG0000049
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_100083
Panther 1 1.100 - - O PTHR19375
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.930

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