DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6000 and pspE

DIOPT Version :10

Sequence 1:NP_651210.3 Gene:CG6000 / 42851 FlyBaseID:FBgn0039145 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_415824.1 Gene:pspE / 945652 ECOCYCID:EG10780 Length:104 Species:Escherichia coli


Alignment Length:101 Identity:27/101 - (26%)
Similarity:49/101 - (48%) Gaps:12/101 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    41 GIVDYDVVKKLPSEPQKLLIDVREPEELKETGQIPASINIPLGVVSQELAASEQLFKSKYGREKP 105
            |::...:|..||....:..||||.||:.::. .:..:|||||..|.:.:|.:           .|
E. coli     5 GLLALALVFSLPVFAAEHWIDVRVPEQYQQE-HVQGAINIPLKEVKERIATA-----------VP 57

  Fly   106 KPETEIIFHCKIGKRSLKAAEAAAALGFKNVKNYQG 141
            .....:..:|..|::|.:|.|..:.:|:.:|:|..|
E. coli    58 DKNDTVKVYCNAGRQSGQAKEILSEMGYTHVENAGG 93

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6000NP_651210.3 RHOD_HSP67B2 43..148 CDD:238777 26/99 (26%)
pspENP_415824.1 PRK10287 1..104 CDD:182356 27/101 (27%)

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