DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG6000 and STR16

DIOPT Version :10

Sequence 1:NP_651210.3 Gene:CG6000 / 42851 FlyBaseID:FBgn0039145 Length:154 Species:Drosophila melanogaster
Sequence 2:NP_851278.1 Gene:STR16 / 836734 AraportID:AT5G66040 Length:120 Species:Arabidopsis thaliana


Alignment Length:99 Identity:33/99 - (33%)
Similarity:47/99 - (47%) Gaps:13/99 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 IDVREPEELKETGQIPASINIP-----LGVVSQELAASEQLFKSKYGREKPKPETEIIFHCKIGK 119
            :|||.|||..: |....:||:|     ...:|:.....||: .|.:|:     ...||..|:.|.
plant    27 LDVRTPEEFSQ-GHACGAINVPYMNRGASGMSKNPDFLEQV-SSHFGQ-----SDNIIVGCQSGG 84

  Fly   120 RSLKAAEAAAALGFKNVKNYQGSWLDWAEREGLP 153
            ||:||.......||..||:..|.:..|| :.|||
plant    85 RSIKATTDLLHAGFTGVKDIVGGYSAWA-KNGLP 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG6000NP_651210.3 RHOD_HSP67B2 43..148 CDD:238777 29/92 (32%)
STR16NP_851278.1 RHOD 10..118 CDD:444705 33/99 (33%)

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