DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg6 and ATG6

DIOPT Version :9

Sequence 1:NP_651209.1 Gene:Atg6 / 42850 FlyBaseID:FBgn0264325 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_567116.1 Gene:ATG6 / 825344 AraportID:AT3G61710 Length:517 Species:Arabidopsis thaliana


Alignment Length:356 Identity:116/356 - (32%)
Similarity:187/356 - (52%) Gaps:35/356 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 NGTGFMLVSDGRDNKKMSAAFKLKAELFDCLSSNSEIDHPLCEECADSMLEIMDRELRIAEDEWD 135
            |.:||            :|...:....||...:.::::.|||.||...:.:.:::|:.....:.:
plant   143 NTSGF------------NATINVLTRAFDIARTQTQVEQPLCLECMRVLSDKLEKEVEDVTRDVE 195

  Fly   136 VYKAYLDEL--EQQRVAPNVEALDKELDELKRSEQQLLSELKELKKEEQSLNDAIAEEEQEREEL 198
            .|:|.:..|  |.|.|....:.| ||..:::..|::|::.::|.:|:...:|..:.|.|.:....
plant   196 AYEACVQRLEGETQDVLSEADFL-KEKKKIEEEERKLVAAIEETEKQNAEVNHQLKELEFKGNRF 259

  Fly   199 HEQEESYWREYTKHRRELMLTEDDKRSLECQIAYSKQQLDKLRDTNIFNITFHIWHAGHFGTINN 263
            :|.|:.||:|:...:.:|:..::::.::..:|..|:..|:.|..||:....|.|.:.|.||||||
plant   260 NELEDRYWQEFNNFQFQLIAHQEERDAILAKIEVSQAHLELLNKTNVLIDAFPIRNDGEFGTINN 324

  Fly   264 FRLGRLPSVSVDWSEINAAWGQTVLLLSALARKIGLTFE-RYRVVPFGNHSYVEVLGENRE-LPL 326
            |||||||::.|:|.||||||||..|||..:.......|: :.::.|.|  ||..::..|.| ..|
plant   325 FRLGRLPAIKVEWDEINAAWGQACLLLHTMCNYFRPKFQCQVKIQPMG--SYPRIVDSNNETYEL 387

  Fly   327 YGSGGFKFFWDTKFDAAMVAFLDCLTQFQKEVEKRDTE--------FLLPYKMEKGKIIDPSTGN 383
            :|.  ...||.|::|.||..:|.||..|......:|.|        ..||||:||.|::      
plant   388 FGP--VNLFWSTRYDKAMTLYLMCLKDFADFANSKDQENNIPPDNCLNLPYKIEKDKVL------ 444

  Fly   384 SYSIKIQFNSEEQWTKALKFMLTNLKWGLAW 414
            .|||...||.:|.||||||:.|.||||.|.|
plant   445 GYSITQSFNKQESWTKALKYTLCNLKWALYW 475

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg6NP_651209.1 APG6 110..418 CDD:282029 110/317 (35%)
ATG6NP_567116.1 APG6_N 170..298 CDD:407569 30/128 (23%)
APG6 304..475 CDD:397986 77/180 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 139 1.000 Domainoid score I1555
eggNOG 1 0.900 - - E1_KOG2751
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2794
Inparanoid 1 1.050 199 1.000 Inparanoid score I1322
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1085752at2759
OrthoFinder 1 1.000 - - FOG0002528
OrthoInspector 1 1.000 - - oto4102
orthoMCL 1 0.900 - - OOG6_102610
Panther 1 1.100 - - LDO PTHR12768
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1898
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1312.830

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