DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg6 and Becn1

DIOPT Version :9

Sequence 1:NP_651209.1 Gene:Atg6 / 42850 FlyBaseID:FBgn0264325 Length:422 Species:Drosophila melanogaster
Sequence 2:NP_062530.2 Gene:Becn1 / 56208 MGIID:1891828 Length:448 Species:Mus musculus


Alignment Length:435 Identity:220/435 - (50%)
Similarity:301/435 - (69%) Gaps:26/435 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 VSFACQRCLQPIVLDEQLEKISVHAMAELSLPI----YGDNGNTLDPQDASSFD----------- 58
            |||.||||.||:.||...:.:....:.||:.|:    ....|.|.: ::|:|.:           
Mouse    13 VSFVCQRCSQPLKLDTSFKILDRVTIQELTAPLLTTAQAKPGETQE-EEANSGEEPFIETRQDGV 76

  Fly    59 --HFVPPYRLTDSINGTGFMLV---SDGRDNKKMSAAFKLKAELFDCLSSNSEIDHPLCEECADS 118
              .|:||.|:..:.:...|.|:   |||...:.:|...|:..:|||.:|..:::||||||||.|:
Mouse    77 SRRFIPPARMMSTESANSFTLIGEASDGGTMENLSRRLKVTGDLFDIMSGQTDVDHPLCEECTDT 141

  Fly   119 MLEIMDRELRIAEDEWDVYKAYLDELEQQRVAPNVEALDKELDELKRSEQQLLSELKELKKEEQS 183
            :|:.:|.:|.:.|:|...||..|:.|||.. ..:.|.|.:||.||...|::|:.||::::|..:.
Mouse   142 LLDQLDTQLNVTENECQNYKRCLEILEQMN-EDDSEQLQRELKELALEEERLIQELEDVEKNRKV 205

  Fly   184 LNDAIAEEEQEREELHEQEESYWREYTKHRRELMLTEDDKRSLECQIAYSKQQLDKLRDTNIFNI 248
            :.:.:.:.:.|.|.|.::|..|.|||::.:|:.:..:|:.:|:|.|:.|::.|||||:.||:||.
Mouse   206 VAENLEKVQAEAERLDQEEAQYQREYSEFKRQQLELDDELKSVENQVRYAQIQLDKLKKTNVFNA 270

  Fly   249 TFHIWHAGHFGTINNFRLGRLPSVSVDWSEINAAWGQTVLLLSALARKIGLTFERYRVVPFGNHS 313
            ||||||:|.|||||||||||||||.|:|:|||||||||||||.|||.|:||.|:|||:||:||||
Mouse   271 TFHIWHSGQFGTINNFRLGRLPSVPVEWNEINAAWGQTVLLLHALANKMGLKFQRYRLVPYGNHS 335

  Fly   314 YVEVL-GENRELPLYGSGGFKFFWDTKFDAAMVAFLDCLTQFQKEVEKRDTEFLLPYKM--EKGK 375
            |:|.| .:::|||||.|||.:||||.|||.||||||||:.||::||||.:|.|.|||:|  ||||
Mouse   336 YLESLTDKSKELPLYCSGGLRFFWDNKFDHAMVAFLDCVQQFKEEVEKGETRFCLPYRMDVEKGK 400

  Fly   376 IIDP-STGNSYSIKIQFNSEEQWTKALKFMLTNLKWGLAWVSSQF 419
            |.|. .:|.|||||.||||||||||||||||||||||||||||||
Mouse   401 IEDTGGSGGSYSIKTQFNSEEQWTKALKFMLTNLKWGLAWVSSQF 445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg6NP_651209.1 APG6 110..418 CDD:282029 182/311 (59%)
Becn1NP_062530.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 47..66 4/19 (21%)
BH3 105..127 CDD:291932 6/21 (29%)
BH3. /evidence=ECO:0000250|UniProtKB:Q14457 106..125 5/18 (28%)
Interaction with BCL2 and BCL2L1 isoform Bcl-X(L). /evidence=ECO:0000250|UniProtKB:Q14457 110..157 19/46 (41%)
APG6 133..444 CDD:282029 182/311 (59%)
MT 194..>267 CDD:289543 23/72 (32%)
Evolutionary conserved domain (ECD). /evidence=ECO:0000305|PubMed:28445460 243..448 147/203 (72%)
Required for membrane-association. /evidence=ECO:0000250|UniProtKB:Q14457 423..448 23/23 (100%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836256
Domainoid 1 1.000 280 1.000 Domainoid score I1673
eggNOG 1 0.900 - - E1_KOG2751
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H2794
Inparanoid 1 1.050 426 1.000 Inparanoid score I1742
Isobase 1 0.950 - 0 Normalized mean entropy S2331
OMA 1 1.010 - - QHG49029
OrthoDB 1 1.010 - - D1085752at2759
OrthoFinder 1 1.000 - - FOG0002528
OrthoInspector 1 1.000 - - oto93471
orthoMCL 1 0.900 - - OOG6_102610
Panther 1 1.100 - - LDO PTHR12768
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1774
SonicParanoid 1 1.000 - - X1898
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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