DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pisd and PSD1

DIOPT Version :9

Sequence 1:NP_651208.1 Gene:Pisd / 42849 FlyBaseID:FBgn0026576 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_193403.2 Gene:PSD1 / 827373 AraportID:AT4G16700 Length:453 Species:Arabidopsis thaliana


Alignment Length:442 Identity:159/442 - (35%)
Similarity:211/442 - (47%) Gaps:83/442 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 RRPQHKQQPNPSQELAQIRRNIL------------------------SRWTGFLLRWAPMG-ICV 110
            ||.||.|:...|..|..||.|..                        |:...||:..|.|. |.:
plant    19 RRFQHSQRRTFSSFLNNIRSNYSGARASPLGGSSGAGAGAGGGGTGDSKGNAFLVPGATMATILM 83

  Fly   111 FGAIEWQ--LQKNRCEKEGKPRTASELQSRIYCS----LPLRIISRCWGWLAACYLPPSLRPYVY 169
            .||:..:  .:..:.|::.:.....|....|..|    ||||.|||.||...:..:|..:|||.|
plant    84 LGALHARRLYEDKKIEEKREKGIELEFHPDIKASFLGVLPLRSISRAWGSFMSLEIPVWMRPYAY 148

  Fly   170 GWYSNTFDVNLSEAMYPEYEHYNSLAEFFTRPLKEGVRVID-QQAPLVSPADGKVLHFG--SASD 231
            ..::..|..||.||..| .|.|.||.:||.|.||||.|.|| ....||||.||.||.||  ..:.
plant   149 KAWARAFHSNLEEAALP-LEEYTSLQDFFVRSLKEGCRPIDPDPCCLVSPVDGTVLRFGELKGNR 212

  Fly   232 SLIEQVKGVSYSIEDFLG--PLETVEQANSGASYAQALKKKSDGS-------------------- 274
            .:||||||.|||:...||  .|..:|......|..:|:..|||.|                    
plant   213 GMIEQVKGHSYSVPALLGNNSLLPMEPEGKNESKEEAVGDKSDKSWLRVSLASPKLRENVSASPM 277

  Fly   275 TELYQCVIYLAPGDYHRFHSPTAWKPTIRRHFSGELLSVSPKVAGWLPGLFCLNERVLYMGQWKH 339
            ..||.|||||.||||||.|||..|..|:||||:|.|..|:.:....:..|:..||||:..|.||.
plant   278 KGLYYCVIYLKPGDYHRIHSPADWNATVRRHFAGRLFPVNERATRTIRNLYVENERVVLEGIWKE 342

  Fly   340 GFFSYTAVGATNVGSVEIYMDADLKTNRWTGFNVGKHPPSTYEYDELVLNKELTEAPKEFG---- 400
            ||.:..||||||:||:|::::.:|:||:.........||....||           |:..|    
plant   343 GFMALAAVGATNIGSIELFIEPELRTNKPKKKLFPTEPPEERVYD-----------PEGLGLRLE 396

  Fly   401 KGDLVGQFNMGSTIVLLFEAP-----------KNFKFDIIAGQKIRVGESLG 441
            ||..|..||||||:||:|:||           .:::|.:..|.::|||::||
plant   397 KGKEVAVFNMGSTVVLIFQAPTANTPEGSSSSSDYRFCVKQGDRVRVGQALG 448

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PisdNP_651208.1 PLN02938 61..441 CDD:178526 157/440 (36%)
PS_Dcarbxylase 180..443 CDD:295959 121/302 (40%)
PSD1NP_193403.2 PLN02938 1..453 CDD:178526 159/442 (36%)
PS_Dcarbxylase 177..449 CDD:280775 111/283 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 182 1.000 Domainoid score I1019
eggNOG 1 0.900 - - E1_COG0688
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H81653
Inparanoid 1 1.050 222 1.000 Inparanoid score I1192
OMA 1 1.010 - - QHG53621
OrthoDB 1 1.010 - - D1226492at2759
OrthoFinder 1 1.000 - - FOG0003152
OrthoInspector 1 1.000 - - oto4198
orthoMCL 1 0.900 - - OOG6_102081
Panther 1 1.100 - - LDO PTHR10067
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X2547
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.840

Return to query results.
Submit another query.