DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pisd and psd3

DIOPT Version :10

Sequence 1:NP_651208.1 Gene:Pisd / 42849 FlyBaseID:FBgn0026576 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_594016.2 Gene:psd3 / 2543178 PomBaseID:SPAC31G5.15 Length:967 Species:Schizosaccharomyces pombe


Alignment Length:295 Identity:77/295 - (26%)
Similarity:120/295 - (40%) Gaps:79/295 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   164 LRPYVYGWYSNTFDVNLSEAMYP--EYEHYNSLAEFFTRPLKEGVRVI---DQQAPLVSPADGKV 223
            ::|::     ..||:|::|...|  .::.:|   |||.|.||.|.|..   |....||||||.::
pombe   716 IKPFI-----RFFDLNMNEVDMPVGGFKTFN---EFFYRKLKPGSRPCAFPDNPDILVSPADSRI 772

  Fly   224 LHFGSASDSLIEQVKGVSYSIEDFLGPLETVEQANSGASYAQALKKKSDGSTELYQCVIYLAPGD 288
            :.:.....:....:||..:::|..||             |:...::...||.    |:..|||.|
pombe   773 VAYECIEKATTYWIKGTEFTVERLLG-------------YSNEAQRFVGGSI----CISRLAPQD 820

  Fly   289 YHRFHSPT--AWKPTIRRHFSGELLSVSPKVAGWLPGLFCLNERVLY-MGQWKHGFFSYTAVGAT 350
            |||||||.  ...|..:  ..|:..:|:|........:|..|.|||. :...:.|.....||||.
pombe   821 YHRFHSPVNGCIGPITK--IEGQYYTVNPMAIRSYLDVFGENVRVLIPIDSNEFGKVMLVAVGAM 883

  Fly   351 NVGSVEIYMDADLKTNRWTGFNVGKHPPSTYEYDELVLNKELTEAPKEFGKGDLVGQFNM-GSTI 414
            .|||..:.:|..                                  |...:.|.:|.|.. |||:
pombe   884 MVGSTVLTVDEG----------------------------------KIVQRSDELGYFKFGGSTV 914

  Fly   415 VLLFEAPK--NFKFDIIAGQK------IRVGESLG 441
            :.||| |.  :|..|::...|      :::||.:|
pombe   915 ITLFE-PNVTSFDEDLLRNSKTKIETLVKMGERIG 948

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PisdNP_651208.1 PS_Dcarbxylase 61..441 CDD:470849 76/293 (26%)
psd3NP_594016.2 C2_PSD 267..374 CDD:176004
PLN02964 <578..948 CDD:215520 76/293 (26%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.