DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pisd and psd-1

DIOPT Version :9

Sequence 1:NP_651208.1 Gene:Pisd / 42849 FlyBaseID:FBgn0026576 Length:447 Species:Drosophila melanogaster
Sequence 2:NP_001021128.1 Gene:psd-1 / 176027 WormBaseID:WBGene00015159 Length:377 Species:Caenorhabditis elegans


Alignment Length:416 Identity:150/416 - (36%)
Similarity:210/416 - (50%) Gaps:68/416 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 LPVARHLRQFSSNPA-SKEA---PLHHRRPQHKQQPNPSQELAQIRRNILS-------RWTGFLL 101
            :|:...||.....|| ||:.   |:..|  ..::..|.|:.:...:..|:.       .|    :
 Worm     2 MPLFNVLRSARMLPAVSKKVVSPPMMLR--SVRELTNQSKNVYATKEVIIGASQKKKRSW----V 60

  Fly   102 RWAPMGICVFGAI---------EWQLQKNRCEKEGKPRTASELQSRIYCSLPLRIISRCWGWLAA 157
            :|..:...:.|..         :|:      |........|..:.|:|.|||....||..|.||.
 Worm    61 KWLSVSTLIIGGASYVGYLFTPDWR------EIVDSKHYYSNWKIRVYLSLPFNTASRVIGGLAN 119

  Fly   158 CYLPPSLRPYVYGWYSNTFDVNLSEAMYPEYEHYNSLAEFFTRPLKEGVRVIDQQAPLVSPADGK 222
            ..:|..||.::.|.::..:|..:.:.:.|::::|.|.|.||.|.|||..|.| ..:||||||||.
 Worm   120 QEIPVWLREHLLGGFARMYDCRMDDCVDPDFKNYPSFAAFFNRKLKESTRPI-SASPLVSPADGT 183

  Fly   223 VLHFGSASDSLIEQVKGVSYSIEDFLGPLETVEQANSGASYAQALKKKSDGSTELYQCVIYLAPG 287
            |||||...|:.||.|||..|.::.|||.::              |.:|.:  .:|||.|||||||
 Worm   184 VLHFGKVEDNKIEYVKGHDYDVDKFLGDVD--------------LPQKDE--LDLYQVVIYLAPG 232

  Fly   288 DYHRFHSPTAWKPTIRRHFSGELLSVSPKVAGWLPGLFCLNERVLYMGQWKHGFFSYTAVGATNV 352
            |||.||||..|.....||..|.||||.|.:...:|.||||||||:..|.|:|||||.:||.||||
 Worm   233 DYHAFHSPARWVANQCRHVPGLLLSVRPTLLSHVPHLFCLNERVVLNGSWRHGFFSMSAVAATNV 297

  Fly   353 GSVEIYMDADLKTN---RWTGFNVGKHPPSTYEYDELVLNKELTEAPKEFGKGDLVGQFNMGSTI 414
            |.:.:..:..|:||   |.|               :.::|.| ||....:..|:.||:|.:||||
 Worm   298 GDIVVDAEPSLRTNIVRRKT---------------QKIMNTE-TEIHAPYVSGERVGEFRLGSTI 346

  Fly   415 VLLFEAPKNFKFDIIAGQKIRVGESL 440
            ||:|:||...||.|.||..:|.|:||
 Worm   347 VLVFQAPPTIKFAIKAGDPLRYGQSL 372

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PisdNP_651208.1 PLN02938 61..441 CDD:178526 147/403 (36%)
PS_Dcarbxylase 180..443 CDD:295959 117/264 (44%)
psd-1NP_001021128.1 PS_Dcarbxylase 142..372 CDD:295959 115/262 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160162629
Domainoid 1 1.000 195 1.000 Domainoid score I1849
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H81653
Inparanoid 1 1.050 230 1.000 Inparanoid score I2201
Isobase 1 0.950 - 0 Normalized mean entropy S2148
OMA 1 1.010 - - QHG53621
OrthoDB 1 1.010 - - D1226492at2759
OrthoFinder 1 1.000 - - FOG0003152
OrthoInspector 1 1.000 - - oto19432
orthoMCL 1 0.900 - - OOG6_102081
Panther 1 1.100 - - LDO PTHR10067
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1016
SonicParanoid 1 1.000 - - X2547
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1615.890

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