Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_014382.1 | Gene: | PUB1 / 855716 | SGDID: | S000004961 | Length: | 453 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 352 | Identity: | 102/352 - (28%) |
---|---|---|---|
Similarity: | 150/352 - (42%) | Gaps: | 69/352 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND--PYAFIEYSNYQAATTALTAM 65
Fly 66 NKRLFLEKEIKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDP 130
Fly 131 HTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSK----------GG 185
Fly 186 GQGGG-------------MG-------------GGPGNGSGV-----------KGSQRHTF---- 209
Fly 210 -------EEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGFSFIKFVTK 267
Fly 268 EAAAHAIEHTHNSEVHGNLVKCFWGKE 294 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 94/328 (29%) |
RRM1_TIA1_like | 9..80 | CDD:240798 | 27/72 (38%) | ||
RRM2_TIA1_like | 96..170 | CDD:240799 | 29/73 (40%) | ||
RRM3_TIA1_like | 221..294 | CDD:240800 | 26/72 (36%) | ||
PUB1 | NP_014382.1 | RRM1_PUB1 | 77..150 | CDD:410026 | 27/72 (38%) |
RRM2_PUB1 | 161..240 | CDD:410031 | 31/81 (38%) | ||
RRM3_PUB1 | 341..414 | CDD:410033 | 28/74 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 151 | 1.000 | Inparanoid score | I1117 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000924 | |
OrthoInspector | 1 | 1.000 | - | - | otm46527 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_103013 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R1842 |
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 1 | 0.960 | - | - | ||
8 | 7.850 |