Protein Alignment Rox8 and SNP1

DIOPT Version :9

• Sequence 1: NP_001262897.1
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_012203.1
• Gene: SNP1 / 854749
• SGDID: S000001323
• Length: 300
• Species: Saccharomyces cerevisiae
• Alignment Length: 258
• Identity: 64/258 - (24%)
• Similarity: 97/258 - (37%)
• Gaps: 59/258 - (22%)

  Fly    13 NLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLE----- 72
            |.:.|...|.:..||....|:.    .:.|.:.|||..:.:........|.:.:.:.::|
Yeast     2 NYNLSKYPDDVSRLFKPRPPLS----YKRPTDYPYAKRQTNPNITGVANLLSTSLKHYMEEFPEG 62

  Fly    73 ---------KEIKV--------------NWATSPGNQPK-TDISSHHHIFVGDLSPEIETETLRE 113
                     ::||:              ||  :|...|. .|...:..||:|.|..:::...|::
Yeast    63 SPNNHLQRYEDIKLSKIKNAQLLDRRLQNW--NPNVDPHIKDTDPYRTIFIGRLPYDLDEIELQK 125

  Fly   114 AFAPFGEISNCRIVRDPHTMKSKGYAFVSF---VKKAEAENAIQAMNGQWIGSR----SIRTNWS 171
            .|..||||...|||:|..|.|||||||:.|   :....|...|....|..|..|    .|....:
Yeast   126 YFVKFGEIEKIRIVKDKITQKSKGYAFIVFKDPISSKMAFKEIGVHRGIQIKDRICIVDIERGRT 190

  Fly   172 TRKLPPPREPSKGGGQGGGMGG-GPGN------GSGVKGSQRHTFEEVYNQSSP---TNTTVY 224
            .:...|.|       .|||:|| |..|      |.....|..:..|..|....|   |:::.|
Yeast   191 VKYFKPRR-------LGGGLGGRGYSNRDSRLPGRFASASTSNPAERNYAPRLPRRETSSSAY 246

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	64/258 (25%)
		RRM1_TIA1_like	9..80	CDD:240798	15/94 (16%)
		RRM2_TIA1_like	96..170	CDD:240799	29/80 (36%)
		RRM3_TIA1_like	221..294	CDD:240800	1/4 (25%)
SNP1	NP_012203.1	U1snRNP70_N	6..95	CDD:403437	15/94 (16%)
		RRM_SNP1_like	89..201	CDD:410194	36/120 (30%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810