Protein Alignment Rox8 and PTI1

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_011672.1
• Gene: PTI1 / 853060
• SGDID: S000003388
• Length: 425
• Species: Saccharomyces cerevisiae
• Alignment Length: 464
• Identity: 81/464 - (17%)
• Similarity: 149/464 - (32%)
• Gaps: 130/464 - (28%)

  Fly     3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
            |:...||.:.||....::|::.::.:..|||...|    ..|||           .|..||.:..
Yeast    16 ENLSSTLQITNLPPEWNQDIITSVVAGSGPVIDIK----AKNDP-----------RTGKLTGVLF 65

  Fly    68 RLFLEKEIKVNWATSPGNQPKTDISSHHHIF---VGDLSPEIETETLREAFAPFGEISNCRIVRD 129
            .....|:.|..|          :|.:....|   :..:.|....:.|||......:....::.||
Yeast    66 DYLTSKDCKRAW----------EILNRIENFPVKIEQIIPPNYKDHLRETANKNSQKQVLQLNRD 120

  Fly   130 PHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGG 194
                   .|.|     :|..|...:.:....|          .|:.|||:              .
Yeast   121 -------SYPF-----EAGLELPFEMVTEVPI----------PRRPPPPQ--------------A 149

  Fly   195 PGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGF 259
            ..|.:.|..:....|.::.:::|....:...|    ::|:.|.:.::..:..|:|.:.:     .
Yeast   150 ANNTNSVSNNTNIQFPDILSKASKHLPSFQDG----SIIAPDKISQNLSKIPPLQLIEI-----I 205

  Fly   260 SFIKFVTKEAAAHAIEHTHNSEVHG----------------------------NLVKCFWGKENG 296
            |.:|.::.:      |:...|::..                            .::|...|:...
Yeast   206 SNLKILSNQ------ENIQKSQLESFLDTNSDITISVTQALLEMGFIDYSVVTKVLKSQVGEAPS 264

  Fly   297 GDNSANNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
            ..:|.|..|:....:....|......:|........||            ...|:|..|.||..|
Yeast   265 LLSSNNTSNSNTPVSVIRNNTPLHVPSNEVSNNPNNMP------------LNVAMPMPMSTPPFI 317

  Fly   362 ---AAQYPYAYQQMGYWYPPATYPT------TQMQTQYMQQGYYPYAYPTSAQQAGGVPCIQFSA 417
               ..|.|:.:...|.:.|||..|:      .....|..||.......|::|.:|.....|  :.
Yeast   318 PLPLQQQPFGFAPPGPFMPPAQGPSMGQPVLANQLGQVQQQNISSTEGPSNANKANDSGTI--NM 380

  Fly   418 AGYRMVPPN 426
            |..:::|.|
Yeast   381 AKLQLLPEN 389

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	16/70 (23%)
		RRM2_TIA1_like	96..170	CDD:409789	12/76 (16%)
		RRM_SF	221..292	CDD:473069	10/98 (10%)
PTI1	NP_011672.1	RRM	21..90	CDD:214636	20/93 (22%)
		CSTF2_hinge	185..255	CDD:433869	7/80 (9%)
		PABP-1234	<306..413	CDD:130689	23/86 (27%)