Sequence 1: | NP_001262897.1 | Gene: | Rox8 / 42848 | FlyBaseID: | FBgn0005649 | Length: | 470 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_011672.1 | Gene: | PTI1 / 853060 | SGDID: | S000003388 | Length: | 425 | Species: | Saccharomyces cerevisiae |
Alignment Length: | 464 | Identity: | 81/464 - (17%) |
---|---|---|---|
Similarity: | 149/464 - (32%) | Gaps: | 130/464 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 ESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNK 67
Fly 68 RLFLEKEIKVNWATSPGNQPKTDISSHHHIF---VGDLSPEIETETLREAFAPFGEISNCRIVRD 129
Fly 130 PHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGMGGG 194
Fly 195 PGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKDKGF 259
Fly 260 SFIKFVTKEAAAHAIEHTHNSEVHG----------------------------NLVKCFWGKENG 296
Fly 297 GDNSANNLNAAAAAAAASANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQI 361
Fly 362 ---AAQYPYAYQQMGYWYPPATYPT------TQMQTQYMQQGYYPYAYPTSAQQAGGVPCIQFSA 417
Fly 418 AGYRMVPPN 426 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rox8 | NP_001262897.1 | ELAV_HUD_SF | 5..274 | CDD:273741 | 46/271 (17%) |
RRM1_TIA1_like | 9..80 | CDD:240798 | 16/70 (23%) | ||
RRM2_TIA1_like | 96..170 | CDD:240799 | 12/76 (16%) | ||
RRM3_TIA1_like | 221..294 | CDD:240800 | 11/100 (11%) | ||
PTI1 | NP_011672.1 | RRM | 21..90 | CDD:214636 | 20/93 (22%) |
CSTF2_hinge | 185..255 | CDD:405077 | 7/80 (9%) | ||
PABP-1234 | <306..413 | CDD:130689 | 23/86 (27%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG0724 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |