Protein Alignment Rox8 and RNA15

DIOPT Version :9

• Sequence 1: NP_001262897.1
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_011471.1
• Gene: RNA15 / 852838
• SGDID: S000003012
• Length: 296
• Species: Saccharomyces cerevisiae
• Alignment Length: 214
• Identity: 47/214 - (21%)
• Similarity: 84/214 - (39%)
• Gaps: 45/214 - (21%)

  Fly    85 NQPKTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEA 149
            |.|.:.:     :::|.:..:...|.:.:..:..|.:.|.:::.||.|.:||||||:.|.....:
Yeast    13 NNPPSRV-----VYLGSIPYDQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESS 72

  Fly   150 ENAIQAMNGQWIGSRSIRTNWS--------TRKLPPPREPSKGGGQGGGMGGGPGNGSGVKGSQR 206
            .:|::.:||..:|||.::..:|        :::.........|.....|......||...:.|..
Yeast    73 ASAVRNLNGYQLGSRFLKCGYSSNSDISGVSQQQQQQYNNINGNNNNNGNNNNNSNGPDFQNSGN 137

  Fly   207 HTFEEVYNQSSP---------TNTTVYCGGFPPNVISDDLMHK------HFVQFGPIQD-VRVFK 255
            ..|   .:|..|         .|.|.     |..:||.:|..|      .|:|  ..|: .|...
Yeast   138 ANF---LSQKFPELPSGIDVNINMTT-----PAMMISSELAKKPKEVQLKFLQ--KFQEWTRAHP 192

  Fly   256 DKGFSFIK------FVTKE 268
            :...|.::      |||.|
Yeast   193 EDAVSLLELCPQLSFVTAE 211

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_001262897.1	ELAV_HUD_SF	5..274	CDD:273741	47/214 (22%)
		RRM1_TIA1_like	9..80	CDD:240798
		RRM2_TIA1_like	96..170	CDD:240799	20/73 (27%)
		RRM3_TIA1_like	221..294	CDD:240800	15/61 (25%)
RNA15	NP_011471.1	RRM_CSTF2_RNA15_like	18..94	CDD:409832	20/80 (25%)
		CSTF_C	255..291	CDD:405061

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0724
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900