Protein Alignment Rox8 and RRT5

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_116689.1
• Gene: RRT5 / 850591
• SGDID: S000001928
• Length: 289
• Species: Saccharomyces cerevisiae
• Alignment Length: 268
• Identity: 50/268 - (18%)
• Similarity: 85/268 - (31%)
• Gaps: 107/268 - (39%)

  Fly     8 TLYVGNLDSSVSEDLLIALFSTMG------PVKSC-KIIREPGNDP-----YAFIEYSNYQAATT 60
            |:|:.||..:.||..|.|..:..|      |.::. :..:...::|     .||.:::|...|..
Yeast    19 TVYISNLPFTASERDLHAFLNNYGASSVLIPTQTVRRFSKRHNSNPRKPLGIAFAQFANNTLALK 83

  Fly    61 ALTAM------NKRLFLEKEIKVNWATSPGNQ----------PKTDISSHHHIFVGDLSPEIETE 109
            |:..:      |::|||:..:.....::|...          .||..::...::..||..:|...
Yeast    84 AIQDLNGTVFQNQKLFLKLHVPYEADSTPDTDVKKPKEKNKVKKTPETAADTVYCHDLPDDITDS 148

  Fly   110 TLREAF--------------------------------------APFGEISNCRIVRDPHTMKSK 136
            .:||.|                                      .|.|:|  |..|....|::.|
Yeast   149 EIRELFQLYSPQEIWIYRSKVYRRKCIPFAPHQITAALVTLQSETPIGDI--CDSVAKTATLRGK 211

  Fly   137 GY----AFVSFVKK---------------------------AEAENAIQAMNGQWIGSRSIRTNW 170
            ..    |:||.:::                           |..|.|.|...||        .|.
Yeast   212 SIIVKPAYVSKIQEIKQLVKDNLTNARDPPPAALAEPAPAPAPVEPAEQVQEGQ--------DNA 268

  Fly   171 STRKLPPP 178
            .|..:|||
Yeast   269 ETNDVPPP 276

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	19/88 (22%)
		RRM2_TIA1_like	96..170	CDD:409789	22/142 (15%)
		RRM_SF	221..292	CDD:473069
RRT5	NP_116689.1	RRM1_RRT5	20..106	CDD:409843	19/85 (22%)
		RRM2_RRT5	132..226	CDD:409844	16/95 (17%)