DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rox8 and NIFK

DIOPT Version :10

Sequence 1:NP_732944.2 Gene:Rox8 / 42848 FlyBaseID:FBgn0005649 Length:470 Species:Drosophila melanogaster
Sequence 2:NP_115766.3 Gene:NIFK / 84365 HGNCID:17838 Length:293 Species:Homo sapiens


Alignment Length:157 Identity:36/157 - (22%)
Similarity:64/157 - (40%) Gaps:33/157 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 IALFS-TMGPVKSCKIIREPGNDPYAFIEYSNYQAATTALTAMNKRLFLEKEIKVNWATSPGNQP 87
            :|.|| ..||:.|.        :|...:|:..      .:..:.||:...|:.:   ..:||   
Human     1 MATFSGPAGPILSL--------NPQEDVEFQK------EVAQVRKRITQRKKQE---QLTPG--- 45

  Fly    88 KTDISSHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENA 152
                    .::|..|...::...:...|:.||.::..|:.|...|..|||||||.|..:..|:..
Human    46 --------VVYVRHLPNLLDETQIFSYFSQFGTVTRFRLSRSKRTGNSKGYAFVEFESEDVAKIV 102

  Fly   153 IQAMNGQWIGSRSIRTNWSTRKLPPPR 179
            .:.||....|.|.:..::    :||.:
Human   103 AETMNNYLFGERLLECHF----MPPEK 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rox8NP_732944.2 RRM1_TIA1_like 9..80 CDD:409788 11/56 (20%)
RRM2_TIA1_like 96..170 CDD:409789 21/73 (29%)
RRM_SF 221..292 CDD:473069
NIFKNP_115766.3 half-pint 2..>151 CDD:130706 36/156 (23%)
RRM_NIFK_like 46..119 CDD:409748 21/72 (29%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 197..239
Interaction with MKI67 226..269
hNIFK_binding 227..266 CDD:463489
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 271..293
Blue background indicates that the domain is not in the aligned region.

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