Protein Alignment Rox8 and RBP47C'

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_175181.1
• Gene: RBP47C' / 841159
• AraportID: AT1G47500
• Length: 434
• Species: Arabidopsis thaliana
• Alignment Length: 412
• Identity: 108/412 - (26%)
• Similarity: 162/412 - (39%)
• Gaps: 111/412 - (26%)

  Fly     7 KTLYVGNLDSSVSEDLLIALFSTM--GPVKSCKIIREPGN---DPYAFIEYSNYQAATTALTAMN 66
            ||::||:|.:.:.|..|.:.|::.  ..:.|.|:||...|   :.|.|:|:.::..|...|...|
plant   103 KTIWVGDLQNWMDEAYLNSAFTSAEEREIVSLKVIRNKHNGSSEGYGFVEFESHDVADKVLQEFN 167

  Fly    67 KRLF--LEKEIKVNWAT-SPG------NQPKTDISSHHHIFVGDLSPEIETETLREAFA-PFGEI 121
            ....  .::..::|||: |.|      |.|  |:|    ||||||:|::....|.|.|: .:..:
plant   168 GAPMPNTDQPFRLNWASFSTGEKRLENNGP--DLS----IFVGDLAPDVSDALLHETFSEKYPSV 226

  Fly   122 SNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGG 186
            ...::|.|.:|.:||||.||.|..:.|...|:..|||....||::|..        |..|.|..|
plant   227 KAAKVVLDANTGRSKGYGFVRFGDENERTKAMTEMNGVKCSSRAMRIG--------PATPRKTNG 283

  Fly   187 ---QGGGMGGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPI 248
               |||.|..|....|               :....|||::.||...:|..:|| .:.|.:||.|
plant   284 YQQQGGYMPSGAFTRS---------------EGDTINTTIFVGGLDSSVTDEDL-KQPFSEFGEI 332

  Fly   249 QDVRVFKDKGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKENGGDNSANNLNAAAAAAAA 313
            ..|::...||..|::||.:..|..|:|..:.:.:....|:..||:     |.||.
plant   333 VSVKIPVGKGCGFVQFVNRPNAEEALEKLNGTVIGKQTVRLSWGR-----NPANK---------- 382

  Fly   314 SANVAAVAAANAAVAAGAGMPGQMMTQQQIAAATGAAIPGQMMTPQQIAAQYPYAYQQMGYWYP- 377
                               .|......|.:....|    ||.             |...||..|
plant   383 -------------------QPRDKYGNQWVDPYYG----GQF-------------YNGYGYMVPQ 411

  Fly   378 --PATYPTTQMQTQYMQQGYYP 397
              |..||...         |||
plant   412 PDPRMYPAAP---------YYP 424

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	18/77 (23%)
		RRM2_TIA1_like	96..170	CDD:409789	28/74 (38%)
		RRM_SF	221..292	CDD:473069	21/70 (30%)
RBP47C'	NP_175181.1	RRM1_SECp43_like	104..186	CDD:409780	21/81 (26%)
		RRM2_SECp43_like	198..277	CDD:409781	31/90 (34%)
		RRM3_NGR1_NAM8_like	305..376	CDD:409782	22/71 (31%)