Protein Alignment Rox8 and RBP45A

DIOPT Version :10

• Sequence 1: NP_732944.2
• Gene: Rox8 / 42848
• FlyBaseID: FBgn0005649
• Length: 470
• Species: Drosophila melanogaster
• Sequence 2: NP_568815.1
• Gene: RBP45A / 835581
• AraportID: AT5G54900
• Length: 387
• Species: Arabidopsis thaliana
• Alignment Length: 311
• Identity: 85/311 - (27%)
• Similarity: 144/311 - (46%)
• Gaps: 39/311 - (12%)

  Fly     4 SQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREP---GNDPYAFIEYSNYQAATTALTAM 65
            |..|:|::|:|...:.|:.::::|:..|...|.|:||..   .::.|.|||:.::..|...|...
plant    57 SDVKSLWIGDLQQWMDENYIMSVFAQSGEATSAKVIRNKLTGQSEGYGFIEFVSHSVAERVLQTY 121

  Fly    66 NKRLF--LEKEIKVNWATSPGNQPKTDISS-HHHIFVGDLSPEIETETLREAFA-PFGEISNCRI 126
            |....  .|:..::|||.:...:.:..... .|.||||||:||:....|.:.|. .:|.:...::
plant   122 NGAPMPSTEQTFRLNWAQAGAGEKRFQTEGPDHTIFVGDLAPEVTDYMLSDTFKNVYGSVKGAKV 186

  Fly   127 VRDPHTMKSKGYAFVSFVKKAEAENAIQAMNGQWIGSRSIRTNWSTRKLPPPREPSKGGGQGGGM 191
            |.|..|.:||||.||.|..:.|...|:..||||:..:|.:|...:..|...|.:|:......|..
plant   187 VLDRTTGRSKGYGFVRFADENEQMRAMTEMNGQYCSTRPMRIGPAANKNALPMQPAMYQNTQGAN 251

  Fly   192 GGGPGNGSGVKGSQRHTFEEVYNQSSPTNTTVYCGGFPPNVISDDLMHKHFVQFGPIQDVRVFKD 256
            .|                     .:.|.|||::.||...|| :||.:...|.|||.:..|::...
plant   252 AG---------------------DNDPNNTTIFVGGLDANV-TDDELKSIFGQFGELLHVKIPPG 294

  Fly   257 KGFSFIKFVTKEAAAHAIEHTHNSEVHGNLVKCFWGKE----------NGG 297
            |...|:::..|.:|.||:...:.:::.|..::..||:.          |||
plant   295 KRCGFVQYANKASAEHALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQWNGG 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rox8	NP_732944.2	RRM1_TIA1_like	9..80	CDD:409788	19/75 (25%)
		RRM2_TIA1_like	96..170	CDD:409789	29/74 (39%)
		RRM_SF	221..292	CDD:473069	20/70 (29%)
RBP45A	NP_568815.1	RRM1_SECp43_like	61..138	CDD:409780	19/76 (25%)
		RRM2_SECp43_like	153..232	CDD:409781	30/78 (38%)
		RRM3_NGR1_NAM8_like	259..330	CDD:409782	21/71 (30%)